RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 PRR16Q569H4 304 aa5.18□□□□□ -1.58
HMGN1-218ENST00000490032 DPY19L2P1Q6NXN4 242 aa5.18□□□□□ -1.58
HMGN1-218ENST00000490032 UBE3BQ7Z3V4 1068 aa5.18□□□□□ -1.58
HMGN1-218ENST00000490032 C1orf162Q8NEQ5 155 aaPredicted RBP5.18□□□□□ -1.58
HMGN1-218ENST00000490032 NUP133Q8WUM0 1156 aa5.18□□□□□ -1.58
HMGN1-218ENST00000490032 DPF2Q92785 391 aa5.18□□□□□ -1.58
HMGN1-218ENST00000490032 NACC2Q96BF6 587 aa5.18□□□□□ -1.58
HMGN1-218ENST00000490032 TUBD1Q9UJT1 453 aa5.18□□□□□ -1.58
HMGN1-218ENST00000490032 COL11A2P13942 1736 aaPredicted RBP5.17□□□□□ -1.58
HMGN1-218ENST00000490032 MYADML2A6NDP7 307 aa5.17□□□□□ -1.58
HMGN1-218ENST00000490032 KIAA0355O15063 1070 aa5.17□□□□□ -1.58
HMGN1-218ENST00000490032 GPANK1O95872 356 aa5.17□□□□□ -1.58
HMGN1-218ENST00000490032 HSD11B2P80365 405 aa5.17□□□□□ -1.58
HMGN1-218ENST00000490032 CYP2A13Q16696 494 aa5.17□□□□□ -1.58
HMGN1-218ENST00000490032 FITM2Q8N6M3 262 aa5.17□□□□□ -1.58
HMGN1-218ENST00000490032 JADE3Q92613 823 aa5.17□□□□□ -1.58
HMGN1-218ENST00000490032 RNF31Q96EP0 1072 aa5.17□□□□□ -1.58
HMGN1-218ENST00000490032 BBC3Q96PG8 261 aaPredicted RBP5.17□□□□□ -1.58
HMGN1-218ENST00000490032 PRDM13Q9H4Q3 707 aa5.17□□□□□ -1.58
HMGN1-218ENST00000490032 GSTO2Q9H4Y5 243 aa5.17□□□□□ -1.58
HMGN1-218ENST00000490032 USP25Q9UHP3 1055 aa5.17□□□□□ -1.58
HMGN1-218ENST00000490032 INTUQ9ULD6 942 aa5.17□□□□□ -1.58
HMGN1-218ENST00000490032 RUVBL1Q9Y265 456 aaKnown RBP5.17□□□□□ -1.58
HMGN1-218ENST00000490032 AATKQ6ZMQ8 1374 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 TCRBV7S2A1N4TA0A589 114 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 NDUFS2O75306 463 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 IARSP41252 1262 aaKnown RBP5.16□□□□□ -1.58
HMGN1-218ENST00000490032 NOMO3P69849 1222 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 KRT85P78386 507 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 SLFN5Q08AF3 891 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 TARDBPQ13148 414 aaKnown RBP eCLIP5.16□□□□□ -1.589e-9■■■□□ 17.5
HMGN1-218ENST00000490032 NOMO2Q5JPE7 1267 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 STRIP1Q5VSL9 837 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 PGM2L1Q6PCE3 622 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 FOXR2Q6PJQ5 311 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 ADGRG3Q86Y34 549 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 RHOT1Q8IXI2 618 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 PPM1NQ8N819 430 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 DCBLD1Q8N8Z6 715 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 MARS2Q96GW9 593 aaKnown RBP5.16□□□□□ -1.58
HMGN1-218ENST00000490032 ZNF764Q96H86 408 aaPredicted RBP5.16□□□□□ -1.58
HMGN1-218ENST00000490032 Q96MF0 132 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 MED15Q96RN5 788 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 PNKPQ96T60 521 aa5.16□□□□□ -1.58
HMGN1-218ENST00000490032 C11orf54Q9H0W9 315 aaPredicted RBP5.16□□□□□ -1.58
HMGN1-218ENST00000490032 SAP30BPQ9UHR5 308 aaKnown RBP5.16□□□□□ -1.58
HMGN1-218ENST00000490032 ARHGEF17Q96PE2 2063 aaPredicted RBP5.16□□□□□ -1.58
HMGN1-218ENST00000490032 CDHR4A6H8M9 788 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 FZD9O00144 591 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 SGTAO43765 313 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 PCDHGA12O60330 932 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 C5AR1P21730 350 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 VAV2P52735 878 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 CDC42EP1Q00587 391 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 CREMQ03060 361 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 CLUL1Q15846 466 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 ATP2B3Q16720 1220 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 ERCC6LQ2NKX8 1250 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 SYDE2Q5VT97 1194 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 Q6ZNX1 250 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 SLC44A3Q8N4M1 653 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 Q8NA96 180 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 SIMC1Q8NDZ2 872 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 NLGN4YQ8NFZ3 816 aaPredicted RBP5.15□□□□□ -1.59
HMGN1-218ENST00000490032 NTN5Q8WTR8 489 aaPredicted RBP5.15□□□□□ -1.59
HMGN1-218ENST00000490032 FAXDC2Q96IV6 333 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 UNKLQ9H9P5 680 aaKnown RBP5.15□□□□□ -1.59
HMGN1-218ENST00000490032 TBCCD1Q9NVR7 557 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 MKS1Q9NXB0 559 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 HSFX1Q9UBD0 423 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 TESQ9UGI8 421 aaKnown RBP5.15□□□□□ -1.59
HMGN1-218ENST00000490032 IPPQ9Y573 584 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 PCDHGA9Q9Y5G4 932 aaKnown RBP5.15□□□□□ -1.59
HMGN1-218ENST00000490032 PCDHGA8Q9Y5G5 932 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 PCDHGA7Q9Y5G6 932 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 PCDHGA6Q9Y5G7 932 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 PCDHGA3Q9Y5H0 932 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 COX11Q9Y6N1 276 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 CADPSQ9ULU8 1353 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 SBNO2Q9Y2G9 1366 aa5.15□□□□□ -1.59
HMGN1-218ENST00000490032 KIAA0391O15091 583 aaKnown RBP5.14□□□□□ -1.59
HMGN1-218ENST00000490032 ERN1O75460 977 aaKnown RBP5.14□□□□□ -1.59
HMGN1-218ENST00000490032 HAUS5O94927 633 aa5.14□□□□□ -1.59
HMGN1-218ENST00000490032 ZFPL1O95159 310 aa5.14□□□□□ -1.59
HMGN1-218ENST00000490032 SLC6A4P31645 630 aa5.14□□□□□ -1.59
HMGN1-218ENST00000490032 CXCR5P32302 372 aa5.14□□□□□ -1.59
HMGN1-218ENST00000490032 SLC16A1P53985 500 aa5.14□□□□□ -1.59
HMGN1-218ENST00000490032 RNF187Q5TA31 235 aaPredicted RBP5.14□□□□□ -1.59
HMGN1-218ENST00000490032 MIGA2Q7L4E1 593 aa5.14□□□□□ -1.59
HMGN1-218ENST00000490032 FAM98AQ8NCA5 519 aaKnown RBP5.14□□□□□ -1.59
HMGN1-218ENST00000490032 IFI44Q8TCB0 444 aa5.14□□□□□ -1.59
HMGN1-218ENST00000490032 HDAC10Q969S8 669 aa5.14□□□□□ -1.59
HMGN1-218ENST00000490032 R3HDMLQ9H3Y0 253 aa5.14□□□□□ -1.59
HMGN1-218ENST00000490032 TDP1Q9NUW8 608 aa5.14□□□□□ -1.59
HMGN1-218ENST00000490032 TRHDEQ9UKU6 1024 aa5.14□□□□□ -1.59
HMGN1-218ENST00000490032 MTO1Q9Y2Z2 717 aaKnown RBP5.14□□□□□ -1.59
HMGN1-218ENST00000490032 INSL6Q9Y581 213 aa5.14□□□□□ -1.59
HMGN1-218ENST00000490032 SALL3Q9BXA9 1300 aa5.14□□□□□ -1.59
HMGN1-218ENST00000490032 KLHL33A6NCF5 533 aa5.13□□□□□ -1.59
HMGN1-218ENST00000490032 HTRA2O43464 458 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms