RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 MED21Q13503 144 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 MOGSQ13724 837 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 MAN2A1Q16706 1144 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 COBLL1Q53SF7 1204 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 TMEM67Q5HYA8 995 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 KIAA1755Q5JYT7 1200 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 ANKRD40Q6AI12 368 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF280DQ6N043 979 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 RFWD3Q6PCD5 774 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 DSTYKQ6XUX3 929 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 RGS9BPQ6ZS82 235 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 TRMT10CQ7L0Y3 403 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 TMC4Q7Z404 712 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 ADGRG6Q86SQ4 1221 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 PATL1Q86TB9 770 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 SFR1Q86XK3 245 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 TREML1Q86YW5 311 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 PEX5LQ8IYB4 626 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 ARHGAP24Q8N264 748 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 LRRC57Q8N9N7 239 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 GDAP1Q8TB36 358 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF398Q8TD17 642 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 CASP10Q92851 521 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 PRICKLE1Q96MT3 831 aaPredicted RBP5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 FAM129BQ96TA1 746 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 C2orf49Q9BVC5 232 aaPredicted RBP5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 NT5C3AQ9H0P0 336 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 LY9Q9HBG7 655 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 PLGRKTQ9HBL7 147 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 CAPN10Q9HC96 672 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 METTL5Q9NRN9 209 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 FAM207AQ9NSI2 230 aaPredicted RBP5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 PPP1R9AQ9ULJ8 1098 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 POLIQ9UNA4 740 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 HBS1LQ9Y450 684 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 ATP6V0A2Q9Y487 856 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 PCDHGB7Q9Y5F8 929 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 SPO11Q9Y5K1 396 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 ROBO1Q9Y6N7 1651 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 SLIT1O75093 1534 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 RPTORQ8N122 1335 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 UBE2Q2LH0YL09 131 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 PODXLO00592 558 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 HGSO14964 777 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 EPHB6O15197 1021 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 MAGEB3O15480 346 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TCEA3O75764 348 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 STK10O94804 968 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 CBX6O95503 412 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 GAS8O95995 478 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ANXA1P04083 346 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 EIF2S1P05198 315 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 IFIT1P09914 478 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 MYL6BP14649 208 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ANPEPP15144 967 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 NFKBIAP25963 317 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 FOXN2P32314 431 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 SLCO1A2P46721 670 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TRAPPC10P48553 1259 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 VPS41P49754 854 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TMED10P49755 219 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 RAP1GDS1P52306 607 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 NPEPPSP55786 919 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 DAB2P98082 770 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 PPIDQ08752 370 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TBL3Q12788 808 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 MPP2Q14168 576 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 PPP2R5BQ15173 497 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF174Q15697 407 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF423Q2M1K9 1284 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TDRD12Q587J7 1177 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TTC38Q5R3I4 469 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 DEPDC1Q5TB30 811 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 MAP3K21Q5TCX8 1036 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ARL6IP4Q66PJ3 421 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 SPTY2D1Q68D10 685 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF449Q6P9G9 518 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 BORAQ6PGQ7 559 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 KLHDC10Q6PID8 442 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ZDHHC24Q6UX98 284 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 IZUMO2Q6UXV1 221 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 PACS1Q6VY07 963 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 RBM44Q6ZP01 1051 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 FAM47EQ6ZV65 393 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 SLFN11Q7Z7L1 901 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 SATL1Q86VE3 508 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 DZIP1Q86YF9 867 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 SYCE1Q8N0S2 351 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 VPS52Q8N1B4 723 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 ANKRD42Q8N9B4 389 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 PPP1R14CQ8TAE6 165 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TRPC4APQ8TEL6 797 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 NSL1Q96IY1 281 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 DNAJC1Q96KC8 554 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 SRPK1Q96SB4 655 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 MIPEPQ99797 713 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TRIM51Q9BSJ1 452 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 CFHR5Q9BXR6 569 aa5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 CELF4Q9BZC1 486 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-206ENST00000489853 TRIM31Q9BZY9 425 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms