RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 RUFY4Q6ZNE9 571 aa16.58■□□□□ 0.24
PTK7-216ENST00000489707 EEPD1Q7L9B9 569 aa16.58■□□□□ 0.24
PTK7-216ENST00000489707 KRT35Q92764 455 aa16.58■□□□□ 0.24
PTK7-216ENST00000489707 CLMNQ96JQ2 1002 aa16.58■□□□□ 0.24
PTK7-216ENST00000489707 HAPLN2Q9GZV7 340 aa16.58■□□□□ 0.24
PTK7-216ENST00000489707 CCDC113Q9H0I3 377 aa16.58■□□□□ 0.24
PTK7-216ENST00000489707 RBPJLQ9UBG7 517 aa16.58■□□□□ 0.24
PTK7-216ENST00000489707 ANAPC7Q9UJX3 599 aa16.58■□□□□ 0.24
PTK7-216ENST00000489707 SCINQ9Y6U3 715 aa16.58■□□□□ 0.24
PTK7-216ENST00000489707 MYO1FO00160 1098 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 SHOX2O60902 331 aaPredicted RBP16.57■□□□□ 0.24
PTK7-216ENST00000489707 VNN1O95497 513 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 CYP1A1P04798 512 aaPredicted RBP16.57■□□□□ 0.24
PTK7-216ENST00000489707 PRKCBP05771 671 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 GNA15P30679 374 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 TTLL4Q14679 1199 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 MAGOHBQ96A72 148 aaKnown RBP16.57■□□□□ 0.24
PTK7-216ENST00000489707 ZBTB9Q96C00 473 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 OPTNQ96CV9 577 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 SPATA33Q96N06 139 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 FMO2Q99518 471 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 EFCC1Q9HA90 598 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 MCM3APO60318 1980 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 IGKV6-21A0A0C4DH24 114 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 HBP1O60381 514 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 PEX10O60683 326 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 PGK2P07205 417 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 ACO1P21399 889 aaKnown RBP16.57■□□□□ 0.24
PTK7-216ENST00000489707 MAN1A1P33908 653 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 FNTAP49354 379 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 CYP1B1Q16678 543 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 DUPD1Q68J44 220 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 TMEM270Q6UE05 265 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 SLC13A5Q86YT5 568 aaPredicted RBP16.57■□□□□ 0.24
PTK7-216ENST00000489707 JAMLQ86YT9 394 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 ABRAQ8N0Z2 381 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 L3MBTL3Q96JM7 780 aaPredicted RBP16.57■□□□□ 0.24
PTK7-216ENST00000489707 ACO2Q99798 780 aaKnown RBP16.57■□□□□ 0.24
PTK7-216ENST00000489707 CELF4Q9BZC1 486 aaKnown RBP16.57■□□□□ 0.24
PTK7-216ENST00000489707 PLAAQ9Y263 795 aa16.57■□□□□ 0.24
PTK7-216ENST00000489707 MYZAPP0CAP1 466 aa16.56■□□□□ 0.24
PTK7-216ENST00000489707 HSD17B3P37058 310 aa16.56■□□□□ 0.24
PTK7-216ENST00000489707 CCNA1P78396 465 aa16.56■□□□□ 0.24
PTK7-216ENST00000489707 MCL1Q07820 350 aa16.56■□□□□ 0.24
PTK7-216ENST00000489707 SNAPC2Q13487 334 aa16.56■□□□□ 0.24
PTK7-216ENST00000489707 TRADDQ15628 312 aa16.56■□□□□ 0.24
PTK7-216ENST00000489707 DUOXA2Q1HG44 320 aa16.56■□□□□ 0.24
PTK7-216ENST00000489707 HSDL1Q3SXM5 330 aa16.56■□□□□ 0.24
PTK7-216ENST00000489707 ADAT2Q7Z6V5 191 aaKnown RBP16.56■□□□□ 0.24
PTK7-216ENST00000489707 DDX42Q86XP3 938 aaKnown RBP eCLIP16.56■□□□□ 0.24
PTK7-216ENST00000489707 RNF149Q8NC42 400 aa16.56■□□□□ 0.24
PTK7-216ENST00000489707 RBBP8NLQ8NC74 664 aaPredicted RBP16.56■□□□□ 0.24
PTK7-216ENST00000489707 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.56■□□□□ 0.24
PTK7-216ENST00000489707 CAPS2Q9BXY5 557 aa16.56■□□□□ 0.24
PTK7-216ENST00000489707 PTPRJQ12913 1337 aa16.56■□□□□ 0.24
PTK7-216ENST00000489707 ARIH2O95376 493 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 KRT14P02533 472 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 SRGAP2CP0DJJ0 459 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 TXNP10599 105 aaKnown RBP16.55■□□□□ 0.24
PTK7-216ENST00000489707 HARSP12081 509 aaKnown RBP16.55■□□□□ 0.24
PTK7-216ENST00000489707 EIF3BP55884 814 aaKnown RBP16.55■□□□□ 0.24
PTK7-216ENST00000489707 YWHAEP62258 255 aaKnown RBP16.55■□□□□ 0.24
PTK7-216ENST00000489707 SKOR1P84550 965 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 PTP4A2Q12974 167 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 PLCB4Q15147 1175 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 SGSM1Q2NKQ1 1148 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 WDR78Q5VTH9 848 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 CCDC62Q6P9F0 684 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 CCDC137Q6PK04 289 aaKnown RBP16.55■□□□□ 0.24
PTK7-216ENST00000489707 DLK2Q6UY11 383 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 TMC3Q7Z5M5 1100 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 PHF13Q86YI8 300 aaPredicted RBP16.55■□□□□ 0.24
PTK7-216ENST00000489707 ARFGAP2Q8N6H7 521 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 C12orf50Q8NA57 414 aaPredicted RBP16.55■□□□□ 0.24
PTK7-216ENST00000489707 PIK3R5Q8WYR1 880 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
PTK7-216ENST00000489707 DPH5Q9H2P9 285 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 TXNRD2Q9NNW7 524 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 MTRF1LQ9UGC7 380 aaKnown RBP16.55■□□□□ 0.24
PTK7-216ENST00000489707 PLXNA1Q9UIW2 1896 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 PASKQ96RG2 1323 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 UNCXA6NJT0 531 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 ASS1P00966 412 aaKnown RBP16.55■□□□□ 0.24
PTK7-216ENST00000489707 PYGMP11217 842 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 MARK3P27448 753 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 MARCKSL1P49006 195 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 C1QBPQ07021 282 aaKnown RBP16.55■□□□□ 0.24
PTK7-216ENST00000489707 TTMPQ5BVD1 217 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 CEP85LQ5SZL2 805 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 MPZL3Q6UWV2 235 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 TSHZ1Q6ZSZ6 1077 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 MON1BQ7L1V2 547 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 PRELID2Q8N945 189 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 CPA5Q8WXQ8 436 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 ATP6V1G3Q96LB4 118 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 FGD4Q96M96 766 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 ERVK-5Q9HDB9 667 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 HOMER3Q9NSC5 361 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 ERAP1Q9NZ08 941 aa16.55■□□□□ 0.24
PTK7-216ENST00000489707 NR2E1Q9Y466 385 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms