RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 PROZP22891 400 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 NMT1P30419 496 aaKnown RBP11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 CLCN4P51793 760 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 ELAVL2Q12926 359 aaKnown RBP11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 NAB2Q15742 525 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 HERC4Q5GLZ8 1057 aaPredicted RBP11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 FAM26FQ5R3K3 315 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 MPZL3Q6UWV2 235 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 ZPBP2Q6X784 338 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 TAS1R1Q7RTX1 841 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 RNF135Q8IUD6 432 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 RPGRIP1Q96KN7 1286 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 FBXL18Q96ME1 805 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 UROC1Q96N76 676 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 TCHPQ9BT92 498 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 TARS2Q9BW92 718 aaKnown RBP11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 APOL5Q9BWW9 433 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 GPR62Q9BZJ7 368 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 SFXN1Q9H9B4 322 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 GRPEL1Q9HAV7 217 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 RXFP1Q9HBX9 757 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 SLC39A2Q9NP94 309 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 EXOC1Q9NV70 894 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 TBC1D7Q9P0N9 293 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 SEL1LQ9UBV2 794 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 NR2E1Q9Y466 385 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 ABLIM1O14639 778 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 TEX28O15482 410 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 TOM1L1O75674 476 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 GLUD1P00367 558 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 MYBP10242 640 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 ABCD1P33897 745 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 PRCPP42785 496 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 KCNA1Q09470 495 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 PSMD2Q13200 908 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 STX1AQ16623 288 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 ATAT1Q5SQI0 421 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 RARS2Q5T160 578 aaKnown RBP11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 ZNF720Q7Z2F6 126 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 ADSSL1Q8N142 457 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 MYCT1Q8N699 235 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 SCFD1Q8WVM8 642 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 ACAP3Q96P50 834 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 PPP1R10Q96QC0 940 aaKnown RBP11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 PAAF1Q9BRP4 392 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 LRFN3Q9BTN0 628 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 DNAJC25Q9H1X3 360 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 IKZF4Q9H2S9 585 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 ST6GALNAC4Q9H4F1 302 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 SLC38A7Q9NVC3 462 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 RMND1Q9NWS8 449 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 FNIP2Q9P278 1114 aa11.5□□□□□ -0.57
SCAMP4-208ENST00000489554 TDRD15B5MCY1 1934 aaKnown RBP11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 SMIM28A0A1B0GU29 152 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 PRR33A8MZF0 331 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 TMEM189-UBE2V1I3L0A0 370 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 CLDN3O15551 220 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 KIF4AO95239 1232 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 COL9A1P20849 921 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 PMS1P54277 932 aaKnown RBP11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 GTF2BQ00403 316 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 NOLC1Q14978 699 aaKnown RBP eCLIP11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 BMT2Q1RMZ1 405 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 ANO6Q4KMQ2 910 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 ZC2HC1CQ53FD0 456 aaPredicted RBP11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 XKR4Q5GH76 650 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 GLRA4Q5JXX5 417 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 PDXDC1Q6P996 788 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 DCLRE1AQ6PJP8 1040 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 SASS6Q6UVJ0 657 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 ALKAL1Q6UXT8 129 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 C15orf39Q6ZRI6 1047 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 HAUS6Q7Z4H7 955 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 GPR149Q86SP6 731 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 ZBTB33Q86T24 672 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 C12orf76Q8N812 135 aaPredicted RBP11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 CEP120Q8N960 986 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 CMASQ8NFW8 434 aaPredicted RBP11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 HDAC7Q8WUI4 952 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 RIN2Q8WYP3 895 aaPredicted RBP11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 RABGGTAQ92696 567 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 BICD1Q96G01 975 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 SNX27Q96L92 541 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 TTPALQ9BTX7 342 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 CXCL16Q9H2A7 254 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 ZHX3Q9H4I2 956 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 POMKQ9H5K3 350 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 C11orf16Q9NQ32 467 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 MAN1C1Q9NR34 630 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 ANKFY1Q9P2R3 1169 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 CACNG4Q9UBN1 327 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 MUTYHQ9UIF7 546 aa11.49□□□□□ -0.57
SCAMP4-208ENST00000489554 FAM86C2PA6NEL3 165 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 K7ENM7 598 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 TRAPPC3O43617 180 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 B3GAT3O94766 335 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 CCDC192P0DO97 292 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 HARSP12081 509 aaKnown RBP11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 KCNE1P15382 129 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 OSTNP61366 133 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms