RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 DERAQ9Y315 318 aa15.4■□□□□ 0.06
CLDN11-209ENST00000489485 TNNC2P02585 160 aa15.4■□□□□ 0.06
CLDN11-209ENST00000489485 TPM2P07951 284 aa15.4■□□□□ 0.06
CLDN11-209ENST00000489485 HTRA4P83105 476 aaPredicted RBP15.4■□□□□ 0.06
CLDN11-209ENST00000489485 VWA3BQ502W6 1294 aa15.4■□□□□ 0.06
CLDN11-209ENST00000489485 SPOUT1Q5T280 376 aaKnown RBP15.4■□□□□ 0.06
CLDN11-209ENST00000489485 ZNF280BQ86YH2 543 aa15.4■□□□□ 0.06
CLDN11-209ENST00000489485 SLC35C1Q96A29 364 aa15.4■□□□□ 0.06
CLDN11-209ENST00000489485 TSPAN18Q96SJ8 248 aa15.4■□□□□ 0.06
CLDN11-209ENST00000489485 NDST4Q9H3R1 872 aa15.4■□□□□ 0.06
CLDN11-209ENST00000489485 RC3H2Q9HBD1 1191 aaKnown RBP15.4■□□□□ 0.06
CLDN11-209ENST00000489485 HCSTQ9UBK5 93 aa15.4■□□□□ 0.06
CLDN11-209ENST00000489485 TUBGCP4Q9UGJ1 667 aa15.4■□□□□ 0.06
CLDN11-209ENST00000489485 A0A1B0GTH6 734 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 CASTOR2A6NHX0 329 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 TEX33O43247 280 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 ZC3H11AO75152 810 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLDN11-209ENST00000489485 DDHD2O94830 711 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 ADCY5O95622 1261 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 GCLMP48507 274 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 GUCY2FP51841 1108 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 CLDN10P78369 228 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 SOX4Q06945 474 aaPredicted RBP15.39■□□□□ 0.05
CLDN11-209ENST00000489485 PPP3CAQ08209 521 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 KCNH2Q12809 1159 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 BIRC3Q13489 604 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 ZBTB6Q15916 424 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 FILIP1LQ4L180 1135 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 C1orf220Q5T0J3 134 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 CMTR2Q8IYT2 770 aaKnown RBP15.39■□□□□ 0.05
CLDN11-209ENST00000489485 TMEM130Q8N3G9 435 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 BEST2Q8NFU1 509 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 ZNF516Q92618 1163 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 RTN4Q9NQC3 1192 aaKnown RBP15.39■□□□□ 0.05
CLDN11-209ENST00000489485 DPP3Q9NY33 737 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 CACNG4Q9UBN1 327 aa15.39■□□□□ 0.05
CLDN11-209ENST00000489485 COL4A6Q14031 1691 aa15.38■□□□□ 0.05
CLDN11-209ENST00000489485 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.38■□□□□ 0.05
CLDN11-209ENST00000489485 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.38■□□□□ 0.05
CLDN11-209ENST00000489485 STX10O60499 249 aa15.38■□□□□ 0.05
CLDN11-209ENST00000489485 KRT19P08727 400 aa15.38■□□□□ 0.05
CLDN11-209ENST00000489485 UBXN1Q04323 297 aa15.38■□□□□ 0.05
CLDN11-209ENST00000489485 TUSC3Q13454 348 aa15.38■□□□□ 0.05
CLDN11-209ENST00000489485 NR1I3Q14994 352 aa15.38■□□□□ 0.05
CLDN11-209ENST00000489485 NAB2Q15742 525 aa15.38■□□□□ 0.05
CLDN11-209ENST00000489485 DNAJB4Q9UDY4 337 aa15.38■□□□□ 0.05
CLDN11-209ENST00000489485 R3HCC1Q9Y3T6 440 aaKnown RBP15.38■□□□□ 0.05
CLDN11-209ENST00000489485 B4GALT3O60512 393 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 PHACTR2O75167 634 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 AFPP02771 609 aaKnown RBP15.37■□□□□ 0.05
CLDN11-209ENST00000489485 ITGB3P05106 788 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 MYOGP15173 224 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 AP3M2P53677 418 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 ENPEPQ07075 957 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 SV2AQ7L0J3 742 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 TRAPPC11Q7Z392 1133 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 FIBCD1Q8N539 461 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 RABGGTAQ92696 567 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 NRDE2Q9H7Z3 1164 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 TRIOBPQ9H2D6 2365 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 LCHNA4D1U4 455 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 LGALS16A8MUM7 142 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 CBFA2T2O43439 604 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 CLSTN1O94985 981 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 TPM3P06753 285 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 CYP3A5P20815 502 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 OR1G1P47890 313 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 MXI1P50539 228 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 CLCNKBP51801 687 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 ZNF75DP51815 510 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 DSC1Q08554 894 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 KRT39Q6A163 491 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 COLGALT2Q8IYK4 626 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 C1orf127Q8N9H9 656 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 PAAF1Q9BRP4 392 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 PRO3102Q9H379 93 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 TMEM8AQ9HCN3 771 aa15.37■□□□□ 0.05
CLDN11-209ENST00000489485 MRPL42Q9Y6G3 142 aaKnown RBP15.37■□□□□ 0.05
CLDN11-209ENST00000489485 C4BPAP04003 597 aaKnown RBP15.36■□□□□ 0.05
CLDN11-209ENST00000489485 ALDH2P05091 517 aa15.36■□□□□ 0.05
CLDN11-209ENST00000489485 POLR2BP30876 1174 aaKnown RBP15.36■□□□□ 0.05
CLDN11-209ENST00000489485 GTF2H1P32780 548 aa15.36■□□□□ 0.05
CLDN11-209ENST00000489485 PBX3P40426 434 aa15.36■□□□□ 0.05
CLDN11-209ENST00000489485 FMO5P49326 533 aa15.36■□□□□ 0.05
CLDN11-209ENST00000489485 ALDH7A1P49419 539 aaKnown RBP15.36■□□□□ 0.05
CLDN11-209ENST00000489485 MCCD1P59942 119 aaPredicted RBP15.36■□□□□ 0.05
CLDN11-209ENST00000489485 CBWD6Q4V339 395 aa15.36■□□□□ 0.05
CLDN11-209ENST00000489485 CBWD3Q5JTY5 395 aa15.36■□□□□ 0.05
CLDN11-209ENST00000489485 CBWD5Q5RIA9 395 aa15.36■□□□□ 0.05
CLDN11-209ENST00000489485 TDRD10Q5VZ19 366 aaKnown RBP15.36■□□□□ 0.05
CLDN11-209ENST00000489485 ANP32BQ92688 251 aaKnown RBP15.36■□□□□ 0.05
CLDN11-209ENST00000489485 CWH43Q9H720 699 aa15.36■□□□□ 0.05
CLDN11-209ENST00000489485 ITGA11Q9UKX5 1188 aa15.36■□□□□ 0.05
CLDN11-209ENST00000489485 PRG3Q9Y2Y8 225 aaPredicted RBP15.36■□□□□ 0.05
CLDN11-209ENST00000489485 CST3P01034 146 aaPredicted RBP15.35■□□□□ 0.05
CLDN11-209ENST00000489485 CA3P07451 260 aa15.35■□□□□ 0.05
CLDN11-209ENST00000489485 PBX2P40425 430 aa15.35■□□□□ 0.05
CLDN11-209ENST00000489485 TRPC3Q13507 836 aa15.35■□□□□ 0.05
CLDN11-209ENST00000489485 ZACNQ401N2 412 aa15.35■□□□□ 0.05
CLDN11-209ENST00000489485 FKBP15Q5T1M5 1219 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms