RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TNFSF14O43557 240 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 EGFP01133 1207 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 ZNF883P0CG24 379 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 ADD2P35612 726 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 PHKA2P46019 1235 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 NOVP48745 357 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 CLDN6P56747 220 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 TARDBPQ13148 414 aaKnown RBP eCLIP8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 AXDND1Q5T1B0 1012 aaPredicted RBP8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 ANO7Q6IWH7 933 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 YAF2Q8IY57 180 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 FRMD1Q8N878 549 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 SPRYD3Q8NCJ5 442 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 RLN3Q8WXF3 142 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 SEPT1Q8WYJ6 367 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 DACT1Q9NYF0 836 aa8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 PRG3Q9Y2Y8 225 aaPredicted RBP8.55□□□□□ -1.04
EXOSC3-206ENST00000489414 A1L4Q6 167 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 TRDMT1O14717 391 aaKnown RBP8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 FLRT2O43155 660 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 KLK10O43240 276 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 NMT2O60551 498 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 KLRC1P26715 233 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 CCR2P41597 374 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 OXCT1P55809 520 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 MRPS9P82933 396 aaKnown RBP8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 GRIK2Q13002 908 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 LONRF3Q496Y0 759 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 RRP12Q5JTH9 1297 aaKnown RBP8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 LMBRD2Q68DH5 695 aaPredicted RBP8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 DHX40Q8IX18 779 aaKnown RBP8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 TRMT2AQ8IZ69 625 aaKnown RBP8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 ZSCAN18Q8TBC5 510 aaPredicted RBP8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 PI4K2BQ8TCG2 481 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 OXER1Q8TDS5 423 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 RHBDD1Q8TEB9 315 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 TNPO1Q92973 898 aaKnown RBP8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 ACDQ96AP0 544 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 E2F7Q96AV8 911 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 CHFRQ96EP1 664 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 SPACA7Q96KW9 195 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 PCYT2Q99447 389 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 MEIS3Q99687 375 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 TTPALQ9BTX7 342 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 TRAIPQ9BWF2 469 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 SNTG2Q9NY99 539 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 WNT6Q9Y6F9 365 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 STAB1Q9NY15 2570 aa8.54□□□□□ -1.04
EXOSC3-206ENST00000489414 A0A1W2PQD8 194 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 ESYT2A0FGR8 921 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 F8W810 466 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 STAM2O75886 525 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 RNF224P0DH78 156 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 PDHBP11177 359 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 SFTPCP11686 197 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 ITGB5P18084 799 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 ADRA1BP35368 520 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 AFF1P51825 1210 aaKnown RBP8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 CDC37Q16543 378 aaPredicted RBP8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 USP41Q3LFD5 358 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 CCDC157Q569K6 752 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 DMRTA1Q5VZB9 504 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 GIMAP6Q6P9H5 292 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 USP49Q70CQ1 688 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 RTL10Q7L3V2 364 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 URGCPQ8TCY9 931 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 KCNE4Q8WWG9 221 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 EAF2Q96CJ1 260 aaPredicted RBP8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 ZFYVE19Q96K21 471 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 PNMA5Q96PV4 448 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 FAM193BQ96PV7 902 aaPredicted RBP8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 DPH1Q9BZG8 443 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 GPR62Q9BZJ7 368 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 ZDHHC5Q9C0B5 715 aa8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 MRPL11Q9Y3B7 192 aaKnown RBP8.53□□□□□ -1.04
EXOSC3-206ENST00000489414 GSG1L2A8MUP6 293 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 AGFG2O95081 481 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 LRG1P02750 347 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 VTNP04004 478 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 CHGBP05060 677 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 CT47B1P0C2W7 299 aaPredicted RBP8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 PTPN2P17706 415 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 EIF4BP23588 611 aaKnown RBP8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 TNK2Q07912 1038 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 ZNF543Q08ER8 600 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 PLEKHG6Q3KR16 790 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 FBXO43Q4G163 708 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 PRSS55Q6UWB4 352 aaPredicted RBP8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 COLGALT2Q8IYK4 626 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 GIMAP8Q8ND71 665 aaPredicted RBP8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 EXOC6Q8TAG9 804 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 SSC4DQ8WTU2 575 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 OSBP2Q969R2 916 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 ZNF578Q96N58 590 aaPredicted RBP8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 IL21RQ9HBE5 538 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 TM7SF3Q9NS93 570 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 MAP3K20Q9NYL2 800 aaKnown RBP8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 BTBD3Q9Y2F9 522 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 PCDHGB2Q9Y5G2 931 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms