RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 TMCO5BA8MYB1 307 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 PGRMC1O00264 195 aaKnown RBP9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 KRIT1O00522 736 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 SLC16A4O15374 487 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 ZNF286BP0CG31 522 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 CYBAP13498 195 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 EZRP15311 586 aaKnown RBP9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 NR2F2P24468 414 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 RPL13P26373 211 aaKnown RBP9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 GTF2BQ00403 316 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 XRCC4Q13426 336 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 ADAM9Q13443 819 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 MYBPC2Q14324 1141 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 KRT71Q3SY84 523 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 GKAP1Q5VSY0 366 aaPredicted RBP9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 HS2ST1Q7LGA3 356 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 HAUS6Q7Z4H7 955 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 TLK2Q86UE8 772 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 METTL13Q8N6R0 699 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 TMEM174Q8WUU8 243 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 CCT6BQ92526 530 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 TMEM143Q96AN5 459 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 AP5M1Q9H0R1 490 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 POLR3FQ9H1D9 316 aaPredicted RBP9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 GANQ9H2C0 597 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 KMT5AQ9NQR1 393 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 SRRDQ9UH36 339 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 AMACRQ9UHK6 382 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 EXOC7Q9UPT5 735 aa9.66□□□□□ -0.86
EXOSC1-211ENST00000489158 IGKV6-21A0A0C4DH24 114 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 BTNL10A8MVZ5 291 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 GPR25O00155 361 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 CETN3O15182 167 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 CLIC2O15247 247 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 DYNC1LI2O43237 492 aaPredicted RBP9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 KPNA6O60684 536 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 DUSP11O75319 330 aaKnown RBP9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 DNAJC8O75937 253 aaPredicted RBP9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 ARL2P36404 184 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 PTK2Q05397 1052 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 PRKCZQ05513 592 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 DHX9Q08211 1270 aaKnown RBP9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 IFFO1Q0D2I5 559 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 IER5Q5VY09 327 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 ZNF571Q7Z3V5 609 aaPredicted RBP9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 TMC3Q7Z5M5 1100 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 TRIM59Q8IWR1 403 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 LRRC57Q8N9N7 239 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 TRIB2Q92519 343 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 CALR3Q96L12 384 aaKnown RBP9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 ACCSQ96QU6 501 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 C16orf70Q9BSU1 422 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 KIFC3Q9BVG8 833 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 CELF4Q9BZC1 486 aaKnown RBP9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 DPH5Q9H2P9 285 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 KDM4CQ9H3R0 1056 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 GABRQQ9UN88 632 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 F8VZ95 297 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 H3BRB1 525 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 MAGEB2O15479 319 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 TTI1O43156 1089 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 ADCY6O43306 1168 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 MGRN1O60291 552 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 FKTNO75072 461 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 GHRP10912 638 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 ACTN1P12814 892 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 HOXD13P35453 343 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 NAMPTP43490 491 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 NPTX2P47972 431 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 MARSP56192 900 aaKnown RBP9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 IGBP1P78318 339 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 NKX3-2P78367 333 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 SF3A3Q12874 501 aaKnown RBP eCLIP9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 IRF2BP2Q7Z5L9 587 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 TPCN2Q8NHX9 752 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 PXYLP1Q8TE99 480 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 LENG1Q96BZ8 264 aaPredicted RBP9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 XPO6Q96QU8 1125 aaKnown RBP9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 KATNAL1Q9BW62 490 aa9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 TUT1Q9H6E5 874 aaKnown RBP9.65□□□□□ -0.86
EXOSC1-211ENST00000489158 DENND3A2RUS2 1198 aa9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 LRRIQ4A6NIV6 560 aa9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 CCT8L1PA6NM43 557 aa9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 CCDC188H7C350 402 aa9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 SLC16A3O15427 465 aaKnown RBP9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 SEPT4O43236 478 aa9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 F2P00734 622 aa9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 CNGA1P29973 690 aa9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 SLC8A1P32418 973 aa9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 CLNS1AP54105 237 aaKnown RBP9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 ELF3P78545 371 aaPredicted RBP9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 MAP2K1Q02750 393 aaPredicted RBP9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 MXD4Q14582 209 aaPredicted RBP9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 IFI16Q16666 785 aaKnown RBP9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 C10orf76Q5T2E6 689 aa9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 TLDC1Q6P9B6 456 aa9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 C12orf56Q8IXR9 622 aa9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 CCDC26Q8TAB7 109 aa9.64□□□□□ -0.87
EXOSC1-211ENST00000489158 CD99L2Q8TCZ2 262 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms