RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ENOX2Q16206 610 aaKnown RBP27.24■■□□□ 1.95
HMGN1-217ENST00000489072 PDXDC1Q6P996 788 aa27.24■■□□□ 1.95
HMGN1-217ENST00000489072 ELMSAN1Q6PJG2 1045 aa27.24■■□□□ 1.95
HMGN1-217ENST00000489072 RSPO2Q6UXX9 243 aaPredicted RBP27.24■■□□□ 1.95
HMGN1-217ENST00000489072 STRA6Q9BX79 667 aa27.24■■□□□ 1.95
HMGN1-217ENST00000489072 MTRRQ9UBK8 725 aa27.24■■□□□ 1.95
HMGN1-217ENST00000489072 LACTBL1A8MY62 500 aa27.23■■□□□ 1.95
HMGN1-217ENST00000489072 TRAPPC3O43617 180 aa27.23■■□□□ 1.95
HMGN1-217ENST00000489072 RPL9P32969 192 aaKnown RBP27.23■■□□□ 1.95
HMGN1-217ENST00000489072 PTPN21Q16825 1174 aa27.23■■□□□ 1.95
HMGN1-217ENST00000489072 TDRD5Q8NAT2 981 aaKnown RBP27.23■■□□□ 1.95
HMGN1-217ENST00000489072 MSTO1Q9BUK6 570 aa27.23■■□□□ 1.95
HMGN1-217ENST00000489072 RHOBTB2Q9BYZ6 727 aa27.23■■□□□ 1.95
HMGN1-217ENST00000489072 TBC1D7Q9P0N9 293 aa27.23■■□□□ 1.95
HMGN1-217ENST00000489072 SEL1LQ9UBV2 794 aa27.23■■□□□ 1.95
HMGN1-217ENST00000489072 FBXW11Q9UKB1 542 aa27.23■■□□□ 1.95
HMGN1-217ENST00000489072 USTQ9Y2C2 406 aa27.23■■□□□ 1.95
HMGN1-217ENST00000489072 DOCK8Q8NF50 2099 aa27.22■■□□□ 1.95
HMGN1-217ENST00000489072 CUTAO60888 179 aa27.22■■□□□ 1.95
HMGN1-217ENST00000489072 GAP43P17677 238 aa27.22■■□□□ 1.95
HMGN1-217ENST00000489072 ZBTB6Q15916 424 aa27.22■■□□□ 1.95
HMGN1-217ENST00000489072 E2F4Q16254 413 aa27.22■■□□□ 1.95
HMGN1-217ENST00000489072 KYAT1Q16773 422 aa27.22■■□□□ 1.95
HMGN1-217ENST00000489072 AXDND1Q5T1B0 1012 aaPredicted RBP27.22■■□□□ 1.95
HMGN1-217ENST00000489072 SHC4Q6S5L8 630 aa27.22■■□□□ 1.95
HMGN1-217ENST00000489072 CCDC149Q6ZUS6 474 aa27.22■■□□□ 1.95
HMGN1-217ENST00000489072 SMG7Q92540 1137 aaKnown RBP27.22■■□□□ 1.95
HMGN1-217ENST00000489072 KIF12Q96FN5 646 aa27.22■■□□□ 1.95
HMGN1-217ENST00000489072 ZDHHC7Q9NXF8 308 aa27.22■■□□□ 1.95
HMGN1-217ENST00000489072 CPSF3Q9UKF6 684 aaKnown RBP27.22■■□□□ 1.95
HMGN1-217ENST00000489072 FRMD3A2A2Y4 597 aa27.21■■□□□ 1.95
HMGN1-217ENST00000489072 ADRB2P07550 413 aa27.21■■□□□ 1.95
HMGN1-217ENST00000489072 OR1D2P34982 312 aa27.21■■□□□ 1.95
HMGN1-217ENST00000489072 PPP2R3AQ06190 1150 aa27.21■■□□□ 1.95
HMGN1-217ENST00000489072 KCNA1Q09470 495 aa27.21■■□□□ 1.95
HMGN1-217ENST00000489072 CYP26C1Q6V0L0 522 aa27.21■■□□□ 1.95
HMGN1-217ENST00000489072 ZDHHC14Q8IZN3 488 aa27.21■■□□□ 1.95
HMGN1-217ENST00000489072 STAMQ92783 540 aa27.21■■□□□ 1.95
HMGN1-217ENST00000489072 HVCN1Q96D96 273 aa27.21■■□□□ 1.95
HMGN1-217ENST00000489072 MRPL44Q9H9J2 332 aaKnown RBP27.21■■□□□ 1.95
HMGN1-217ENST00000489072 RPF1Q9H9Y2 349 aaKnown RBP27.21■■□□□ 1.95
HMGN1-217ENST00000489072 STYXL1Q9Y6J8 313 aa27.21■■□□□ 1.95
HMGN1-217ENST00000489072 ZMYND10O75800 440 aa27.2■■□□□ 1.94
HMGN1-217ENST00000489072 IDEP14735 1019 aa27.2■■□□□ 1.94
HMGN1-217ENST00000489072 CASP5P51878 434 aa27.2■■□□□ 1.94
HMGN1-217ENST00000489072 RAB33AQ14088 237 aa27.2■■□□□ 1.94
HMGN1-217ENST00000489072 TRIM67Q6ZTA4 783 aa27.2■■□□□ 1.94
HMGN1-217ENST00000489072 FGFBP2Q9BYJ0 223 aa27.2■■□□□ 1.94
HMGN1-217ENST00000489072 PRKD2Q9BZL6 878 aa27.2■■□□□ 1.94
HMGN1-217ENST00000489072 WDR6Q9NNW5 1121 aaKnown RBP27.2■■□□□ 1.94
HMGN1-217ENST00000489072 NUB1Q9Y5A7 615 aa27.2■■□□□ 1.94
HMGN1-217ENST00000489072 BACE2Q9Y5Z0 518 aa27.2■■□□□ 1.94
HMGN1-217ENST00000489072 CDY1Q9Y6F8 540 aa27.2■■□□□ 1.94
HMGN1-217ENST00000489072 ZNF318Q5VUA4 2279 aa27.19■■□□□ 1.94
HMGN1-217ENST00000489072 LRPAP1P30533 357 aa27.19■■□□□ 1.94
HMGN1-217ENST00000489072 GUCY2FP51841 1108 aa27.19■■□□□ 1.94
HMGN1-217ENST00000489072 VARS2Q5ST30 1063 aaKnown RBP27.19■■□□□ 1.94
HMGN1-217ENST00000489072 HFE2Q6ZVN8 426 aa27.19■■□□□ 1.94
HMGN1-217ENST00000489072 ANKS3Q6ZW76 656 aa27.19■■□□□ 1.94
HMGN1-217ENST00000489072 SUSD3Q96L08 255 aa27.19■■□□□ 1.94
HMGN1-217ENST00000489072 OLFML3Q9NRN5 406 aa27.19■■□□□ 1.94
HMGN1-217ENST00000489072 LIMD1Q9UGP4 676 aa27.19■■□□□ 1.94
HMGN1-217ENST00000489072 UBQLN1Q9UMX0 589 aaKnown RBP27.19■■□□□ 1.94
HMGN1-217ENST00000489072 ZDBF2Q9HCK1 2354 aa27.19■■□□□ 1.94
HMGN1-217ENST00000489072 CLUHO75153 1309 aa27.18■■□□□ 1.94
HMGN1-217ENST00000489072 N4BP1O75113 896 aaKnown RBP27.18■■□□□ 1.94
HMGN1-217ENST00000489072 ASGR2P07307 311 aa27.18■■□□□ 1.94
HMGN1-217ENST00000489072 CYP3A5P20815 502 aa27.18■■□□□ 1.94
HMGN1-217ENST00000489072 ADSSP30520 456 aa27.18■■□□□ 1.94
HMGN1-217ENST00000489072 ACOT2P49753 483 aa27.18■■□□□ 1.94
HMGN1-217ENST00000489072 DNM1Q05193 864 aaKnown RBP27.18■■□□□ 1.94
HMGN1-217ENST00000489072 L1TD1Q5T7N2 865 aaKnown RBP27.18■■□□□ 1.94
HMGN1-217ENST00000489072 ADALQ6DHV7 355 aa27.18■■□□□ 1.94
HMGN1-217ENST00000489072 OTOP3Q7RTS5 596 aa27.18■■□□□ 1.94
HMGN1-217ENST00000489072 KCNG4Q8TDN1 519 aa27.18■■□□□ 1.94
HMGN1-217ENST00000489072 PANK4Q9NVE7 773 aa27.18■■□□□ 1.94
HMGN1-217ENST00000489072 KBTBD4Q9NVX7 518 aa27.18■■□□□ 1.94
HMGN1-217ENST00000489072 SYN3O14994 580 aa27.17■■□□□ 1.94
HMGN1-217ENST00000489072 GCNT3O95395 438 aa27.17■■□□□ 1.94
HMGN1-217ENST00000489072 MCM4P33991 863 aa27.17■■□□□ 1.94
HMGN1-217ENST00000489072 LIN9Q5TKA1 542 aa27.17■■□□□ 1.94
HMGN1-217ENST00000489072 JADE1Q6IE81 842 aa27.17■■□□□ 1.94
HMGN1-217ENST00000489072 SLFN12LQ6IEE8 588 aa27.17■■□□□ 1.94
HMGN1-217ENST00000489072 PLCD3Q8N3E9 789 aa27.17■■□□□ 1.94
HMGN1-217ENST00000489072 DHX58Q96C10 678 aa27.17■■□□□ 1.94
HMGN1-217ENST00000489072 FAM212AQ96EL1 285 aa27.17■■□□□ 1.94
HMGN1-217ENST00000489072 TNMDQ9H2S6 317 aa27.17■■□□□ 1.94
HMGN1-217ENST00000489072 PIDD1Q9HB75 910 aa27.17■■□□□ 1.94
HMGN1-217ENST00000489072 AGO2Q9UKV8 859 aaKnown RBP27.17■■□□□ 1.94
HMGN1-217ENST00000489072 PCDHA7Q9UN72 937 aa27.17■■□□□ 1.94
HMGN1-217ENST00000489072 MUC6Q6W4X9 2439 aa27.17■■□□□ 1.94
HMGN1-217ENST00000489072 TMEM221A6NGB7 291 aa27.16■■□□□ 1.94
HMGN1-217ENST00000489072 M0R296 226 aa27.16■■□□□ 1.94
HMGN1-217ENST00000489072 TBC1D4O60343 1298 aa27.16■■□□□ 1.94
HMGN1-217ENST00000489072 C8AP07357 584 aa27.16■■□□□ 1.94
HMGN1-217ENST00000489072 MRPL58Q14197 206 aaKnown RBP27.16■■□□□ 1.94
HMGN1-217ENST00000489072 ATL3Q6DD88 541 aa27.16■■□□□ 1.94
HMGN1-217ENST00000489072 ACSF2Q96CM8 615 aaPredicted RBP27.16■■□□□ 1.94
HMGN1-217ENST00000489072 ACCSQ96QU6 501 aa27.16■■□□□ 1.94
HMGN1-217ENST00000489072 CUEDC2Q9H467 287 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms