RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CMASQ8NFW8 434 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-232ENST00000489053 C18orf25Q96B23 403 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-232ENST00000489053 DHX58Q96C10 678 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 TSPAN18Q96SJ8 248 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 LRFN3Q9BTN0 628 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 PANK4Q9NVE7 773 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 ZDHHC7Q9NXF8 308 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 USTQ9Y2C2 406 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 MORC2Q9Y6X9 1032 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-232ENST00000489053 TRIOO75962 3097 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 MYMKA6NI61 221 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 C2CD4DB7Z1M9 353 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 I3L4J1 428 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 SYN3O14994 580 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 RFPL2O75678 378 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 PIGRP01833 764 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 LRG1P02750 347 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 TKTP29401 623 aaKnown RBP9.92□□□□□ -0.82
HDAC6-232ENST00000489053 OR1D2P34982 312 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 BRCC3P46736 316 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 SPAG1Q07617 926 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 TMEM132DQ14C87 1099 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 PTPN21Q16825 1174 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 ZC2HC1CQ53FD0 456 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-232ENST00000489053 XKR4Q5GH76 650 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 ZNF280DQ6N043 979 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 KANK3Q6NY19 840 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 RNF168Q8IYW5 571 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-232ENST00000489053 CEP57L1Q8IYX8 460 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 ELMOD1Q8N336 334 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 LNX1Q8TBB1 728 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-232ENST00000489053 EDAQ92838 391 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 KHSRPQ92945 711 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDAC6-232ENST00000489053 CXCL16Q9H2A7 254 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 TNMDQ9H2S6 317 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 MAGEF1Q9HAY2 307 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 CDH22Q9UJ99 828 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 AGO2Q9UKV8 859 aaKnown RBP9.92□□□□□ -0.82
HDAC6-232ENST00000489053 CDY1Q9Y6F8 540 aa9.92□□□□□ -0.82
HDAC6-232ENST00000489053 CLUHO75153 1309 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-232ENST00000489053 A0A0B4J269 797 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 TMEM221A6NGB7 291 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 LACTBL1A8MY62 500 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 M0R296 226 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 ZMYND10O75800 440 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 IL18RAPO95256 599 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 C8AP07357 584 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 HNRNPA1P09651 372 aaKnown RBP eCLIP9.91□□□□□ -0.82
HDAC6-232ENST00000489053 CPB1P15086 417 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 CYP3A5P20815 502 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 FGFR3P22607 806 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 ACOT2P49753 483 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 KRT85P78386 507 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 ZXDAP98168 799 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 SOX4Q06945 474 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-232ENST00000489053 NAB2Q15742 525 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 SLC10A6Q3KNW5 377 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 CTXN3Q4LDR2 81 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 VARS2Q5ST30 1063 aaKnown RBP9.91□□□□□ -0.82
HDAC6-232ENST00000489053 L1TD1Q5T7N2 865 aaKnown RBP9.91□□□□□ -0.82
HDAC6-232ENST00000489053 ALKAL1Q6UXT8 129 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 TRIM67Q6ZTA4 783 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 GET4Q7L5D6 327 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-232ENST00000489053 ZNF720Q7Z2F6 126 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 METTL23Q86XA0 190 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 UBALD2Q8IYN6 164 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 SLC7A14Q8TBB6 771 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 PBXIP1Q96AQ6 731 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 CCDC34Q96HJ3 373 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 ZMAT2Q96NC0 199 aaKnown RBP9.91□□□□□ -0.82
HDAC6-232ENST00000489053 PRKD2Q9BZL6 878 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 MFSD1Q9H3U5 465 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 ST6GALNAC4Q9H4F1 302 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 TMEM206Q9H813 350 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 OLFML3Q9NRN5 406 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 MTRRQ9UBK8 725 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 TUBGCP4Q9UGJ1 667 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 LIMD1Q9UGP4 676 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 SORCS3Q9UPU3 1222 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 BACE2Q9Y5Z0 518 aa9.91□□□□□ -0.82
HDAC6-232ENST00000489053 ABLIM1O14639 778 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 CCL16O15467 120 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 POLR2DO15514 142 aaKnown RBP9.9□□□□□ -0.82
HDAC6-232ENST00000489053 CLSTN1O94985 981 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 EFEMP2O95967 443 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 LDHAP00338 332 aaKnown RBP9.9□□□□□ -0.82
HDAC6-232ENST00000489053 ODC1P11926 461 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 PAX3P23760 479 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 FSHRP23945 695 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 TNFSF9P41273 254 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 YWHAHQ04917 246 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-232ENST00000489053 SIGLEC14Q08ET2 396 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 RAB33AQ14088 237 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 ENOX2Q16206 610 aaKnown RBP9.9□□□□□ -0.82
HDAC6-232ENST00000489053 UVSSAQ2YD98 709 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 AXDND1Q5T1B0 1012 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-232ENST00000489053 JADE1Q6IE81 842 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 ARMCX5Q6P1M9 558 aa9.9□□□□□ -0.82
HDAC6-232ENST00000489053 ZDHHC14Q8IZN3 488 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms