RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 RPL13P26373 211 aaKnown RBP16.43■□□□□ 0.22
FDPS-213ENST00000489003 PMS1P54277 932 aaKnown RBP16.43■□□□□ 0.22
FDPS-213ENST00000489003 TMEM132DQ14C87 1099 aa16.43■□□□□ 0.22
FDPS-213ENST00000489003 SURF1Q15526 300 aa16.43■□□□□ 0.22
FDPS-213ENST00000489003 NT5DC4Q86YG4 428 aa16.43■□□□□ 0.22
FDPS-213ENST00000489003 RNF168Q8IYW5 571 aaPredicted RBP16.43■□□□□ 0.22
FDPS-213ENST00000489003 VPS52Q8N1B4 723 aa16.43■□□□□ 0.22
FDPS-213ENST00000489003 C3orf58Q8NDZ4 430 aa16.43■□□□□ 0.22
FDPS-213ENST00000489003 BEST2Q8NFU1 509 aa16.43■□□□□ 0.22
FDPS-213ENST00000489003 DPP3Q9NY33 737 aa16.43■□□□□ 0.22
FDPS-213ENST00000489003 PCDHGC5Q9Y5F6 944 aa16.43■□□□□ 0.22
FDPS-213ENST00000489003 TRANK1O15050 2925 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 PODXLO00592 558 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 PIRO00625 290 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 CXCL14O95715 111 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 SOD2P04179 222 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 CTSAP10619 480 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 NR2F2P24468 414 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 PPP1R2P41236 205 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 CYP24A1Q07973 514 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 STIM1Q13586 685 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 PSMD6Q15008 389 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 CCDC85BQ15834 202 aaPredicted RBP16.42■□□□□ 0.22
FDPS-213ENST00000489003 EDRF1Q3B7T1 1238 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 SCARA3Q6AZY7 606 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 FUT10Q6P4F1 479 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 TMC7Q7Z402 723 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 PLEKHO2Q8TD55 490 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 HASPINQ8TF76 798 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 CCDC127Q96BQ5 260 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 FAM84AQ96KN4 292 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 POP1Q99575 1024 aaKnown RBP16.42■□□□□ 0.22
FDPS-213ENST00000489003 GZF1Q9H116 711 aaPredicted RBP16.42■□□□□ 0.22
FDPS-213ENST00000489003 ZBP1Q9H171 429 aa16.42■□□□□ 0.22
FDPS-213ENST00000489003 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.42■□□□□ 0.22
FDPS-213ENST00000489003 CDH23Q9H251 3354 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 TRIM49BA6NDI0 452 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 HIDE1A8MVS5 230 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 PSMA7O14818 248 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 PPEF2O14830 753 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 LILRB3O75022 631 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 BRCC3P46736 316 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 TFAMQ00059 246 aaKnown RBP16.41■□□□□ 0.22
FDPS-213ENST00000489003 KIAA0319Q5VV43 1072 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 C9orf57Q5W0N0 161 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 CEP135Q66GS9 1140 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 KLHL10Q6JEL2 608 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 PDE12Q6L8Q7 609 aaKnown RBP16.41■□□□□ 0.22
FDPS-213ENST00000489003 RBM43Q6ZSC3 357 aaKnown RBP16.41■□□□□ 0.22
FDPS-213ENST00000489003 MICALL1Q8N3F8 863 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 MRPL43Q8N983 215 aaKnown RBP16.41■□□□□ 0.22
FDPS-213ENST00000489003 CACTINQ8WUQ7 758 aaKnown RBP16.41■□□□□ 0.22
FDPS-213ENST00000489003 NELFBQ8WX92 580 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 PPM1EQ8WY54 764 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 ZNF516Q92618 1163 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 TCF25Q9BQ70 676 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 HERC2P3Q9BVR0 1158 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 NSUN3Q9H649 340 aaKnown RBP16.41■□□□□ 0.22
FDPS-213ENST00000489003 NGRNQ9NPE2 291 aaKnown RBP16.41■□□□□ 0.22
FDPS-213ENST00000489003 CHST7Q9NS84 486 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 INTS13Q9NVM9 706 aa16.41■□□□□ 0.22
FDPS-213ENST00000489003 SCN1AP35498 2009 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 ANO9A1A5B4 782 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 C2orf71A6NGG8 1288 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 I3L4J1 428 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 CETN3O15182 167 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 AKAP3O75969 853 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 PSMC2P35998 433 aaKnown RBP16.4■□□□□ 0.22
FDPS-213ENST00000489003 NLRP12P59046 1061 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 FKBP3Q00688 224 aaKnown RBP16.4■□□□□ 0.22
FDPS-213ENST00000489003 DUOXA2Q1HG44 320 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 USP41Q3LFD5 358 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 TIGD5Q53EQ6 642 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 TCEAL5Q5H9L2 206 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 FAM171A1Q5VUB5 890 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 PLPP4Q5VZY2 271 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 LMBRD2Q68DH5 695 aaPredicted RBP16.4■□□□□ 0.22
FDPS-213ENST00000489003 ADGRD2Q7Z7M1 963 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 ZC3H3Q8IXZ2 948 aaKnown RBP16.4■□□□□ 0.22
FDPS-213ENST00000489003 OR5B17Q8NGF7 314 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 PARD3BQ8TEW8 1205 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 AUTS2Q8WXX7 1259 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 EEF2KMTQ96G04 330 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 B3GALT6Q96L58 329 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 TSG101Q99816 390 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 DUSP9Q99956 384 aaKnown RBP16.4■□□□□ 0.22
FDPS-213ENST00000489003 ENTPD7Q9NQZ7 604 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 STK39Q9UEW8 545 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 FRMD4BQ9Y2L6 1034 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 PTPRJQ12913 1337 aa16.4■□□□□ 0.22
FDPS-213ENST00000489003 MAPK13O15264 365 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 DLATP10515 647 aaKnown RBP16.39■□□□□ 0.21
FDPS-213ENST00000489003 TNNI1P19237 187 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 STX17P56962 302 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 LILRA4P59901 499 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 MCCD1P59942 119 aaPredicted RBP16.39■□□□□ 0.21
FDPS-213ENST00000489003 DSG1Q02413 1049 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 LRRC63Q05C16 580 aa16.39■□□□□ 0.21
FDPS-213ENST00000489003 SMC1AQ14683 1233 aaKnown RBP16.39■□□□□ 0.21
FDPS-213ENST00000489003 BMS1Q14692 1282 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms