RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 POM121BA6NF01 834 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 A6NLC8 198 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 NPIPB8E9PQR5 432 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 SYT5O00445 386 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 DDX3XO00571 662 aaKnown RBP eCLIP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 NPC1O15118 1278 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 IRAK2O43187 625 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 HOXC11O43248 304 aaPredicted RBP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 HTRA2O43464 458 aaPredicted RBP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 AMY2AP04746 511 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 POLBP06746 335 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 FAM200BP0CF97 657 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 HNRNPLP14866 589 aaKnown RBP eCLIP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 AMY2BP19961 511 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 TACR1P25103 407 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 PTX3P26022 381 aaPredicted RBP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 HOXC13P31276 330 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 KRT9P35527 623 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 SERPINF1P36955 418 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 WASP42768 502 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 MAPK10P53779 464 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 SLC5A3P53794 718 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 IRF9Q00978 393 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 SMAD4Q13485 552 aaKnown RBP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 DAG1Q14118 895 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 EFR3AQ14156 821 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 TAF12Q16514 161 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 CRY1Q16526 586 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 PFKFB4Q16877 469 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 INF2Q27J81 1249 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 SLC35G1Q2M3R5 365 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 HS1BP3Q53T59 392 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 HABP4Q5JVS0 413 aaKnown RBP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 FBXO47Q5MNV8 452 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 MBNL2Q5VZF2 373 aaKnown RBP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 ITPRIPL1Q6GPH6 555 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 IQCEQ6IPM2 695 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 PLBD1Q6P4A8 553 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 DAAM2Q86T65 1068 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 CXorf67Q86X51 503 aaPredicted RBP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 CPNE8Q86YQ8 564 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 ZZZ3Q8IYH5 903 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 GALNT15Q8N3T1 639 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 KYQ8NBH2 561 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 ZMIZ2Q8NF64 920 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 DNERQ8NFT8 737 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 PLBD2Q8NHP8 589 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 KLHDC4Q8TBB5 520 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 DPF3Q92784 378 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 DLG3Q92796 817 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 CDHR1Q96JP9 859 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 MSLNLQ96KJ4 702 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 C16orf92Q96LL3 132 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 ZMAT2Q96NC0 199 aaKnown RBP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 ASB2Q96Q27 587 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 SLC2A13Q96QE2 648 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 QRSL1Q9H0R6 528 aaKnown RBP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 ELAC1Q9H777 363 aaKnown RBP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 VPS45Q9NRW7 570 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 PPP4R1LQ9P1A2 415 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.93□□□□□ -1.78
PRPF4-203ENST00000488937 FBLN5Q9UBX5 448 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 ZNF112Q9UJU3 913 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 LIMCH1Q9UPQ0 1083 aa3.93□□□□□ -1.78
PRPF4-203ENST00000488937 MYO1FO00160 1098 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 ACKR2O00590 384 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 NPHS1O60500 1241 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 INMTO95050 263 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 IL18RAPO95256 599 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 CYP17A1P05093 508 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 HNRNPCP07910 306 aaKnown RBP eCLIP3.92□□□□□ -1.78
PRPF4-203ENST00000488937 ATP1A3P13637 1013 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 MTHFD2P13995 350 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 PDE6AP16499 860 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 OAS2P29728 719 aaKnown RBP3.92□□□□□ -1.78
PRPF4-203ENST00000488937 TUBP50607 506 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 SLC16A1P53985 500 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 CLNS1AP54105 237 aaKnown RBP3.92□□□□□ -1.78
PRPF4-203ENST00000488937 NR1H2P55055 460 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 JAM2P57087 298 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 RAB1AP62820 205 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 TLE2Q04725 743 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 SEPT2Q15019 361 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 GPR19Q15760 415 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 CCNG2Q16589 344 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.92□□□□□ -1.78
PRPF4-203ENST00000488937 FAM110CQ1W6H9 321 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 MUM1Q2TAK8 710 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 FAM205BPQ63HN1 556 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 MCTP2Q6DN12 878 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 TANGO2Q6ICL3 276 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 JMJD6Q6NYC1 403 aaPredicted RBP3.92□□□□□ -1.78
PRPF4-203ENST00000488937 ZNF585AQ6P3V2 769 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 CPOQ8IVL8 374 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 NDUFAF2Q8N183 169 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 C7orf31Q8N865 590 aa3.92□□□□□ -1.78
PRPF4-203ENST00000488937 TXNDC5Q8NBS9 432 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms