RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 SNX27Q96L92 541 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 APOL6Q9BWW8 343 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 DEF6Q9H4E7 631 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 HAUS4Q9H6D7 363 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 APOBEC3GQ9HC16 384 aaKnown RBP11.76□□□□□ -0.53
COL21A1-211ENST00000488912 REXO2Q9Y3B8 237 aaKnown RBP11.76□□□□□ -0.53
COL21A1-211ENST00000488912 A0A0U1RQJ8 604 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 SSU72P8A0A1W2PR75 194 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 RECQL4O94761 1208 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 AKAP5P24588 427 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 CD52P31358 61 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 CYLC1P35663 651 aaPredicted RBP11.76□□□□□ -0.53
COL21A1-211ENST00000488912 CDK7P50613 346 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 MFAP3P55082 362 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 NOP14P78316 857 aaKnown RBP11.76□□□□□ -0.53
COL21A1-211ENST00000488912 GCNT1Q02742 428 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 PTK2Q05397 1052 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 MAPK8IP2Q13387 824 aaPredicted RBP11.76□□□□□ -0.53
COL21A1-211ENST00000488912 LPIN1Q14693 890 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 TMEM132DQ14C87 1099 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 ASTE1Q2TB18 679 aaPredicted RBP11.76□□□□□ -0.53
COL21A1-211ENST00000488912 FAM26DQ5JW98 314 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 REXO1L1PQ8IX06 675 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 C1orf127Q8N9H9 656 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 SMG8Q8ND04 991 aaKnown RBP11.76□□□□□ -0.53
COL21A1-211ENST00000488912 ATRIPQ8WXE1 791 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 C16orf45Q96MC5 204 aaPredicted RBP11.76□□□□□ -0.53
COL21A1-211ENST00000488912 PADI3Q9ULW8 664 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 IPPQ9Y573 584 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 MKI67P46013 3256 aaKnown RBP11.76□□□□□ -0.53
COL21A1-211ENST00000488912 ZNF263O14978 683 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 GPR182O15218 404 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 ZSCAN12O43309 604 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 CAND2O75155 1236 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 CLSTN1O94985 981 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 ASS1P00966 412 aaKnown RBP11.75□□□□□ -0.53
COL21A1-211ENST00000488912 FERP16591 822 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 PRKCIP41743 596 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 YARSP54577 528 aaKnown RBP11.75□□□□□ -0.53
COL21A1-211ENST00000488912 MYL6P60660 151 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 PAK2Q13177 524 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 TRAF7Q6Q0C0 670 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 FAM126BQ8IXS8 530 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 SHC3Q92529 594 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 ZMAT2Q96NC0 199 aaKnown RBP11.75□□□□□ -0.53
COL21A1-211ENST00000488912 RNF39Q9H2S5 420 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 ERVK-5Q9HDB9 667 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 SIX4Q9UIU6 781 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 C2CD2Q9Y426 696 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 NUB1Q9Y5A7 615 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 UMODL1Q5DID0 1318 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 SCN1AP35498 2009 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 KIAA0100Q14667 2235 aaKnown RBP11.75□□□□□ -0.53
COL21A1-211ENST00000488912 EIF3CLB5ME19 914 aaKnown RBP11.75□□□□□ -0.53
COL21A1-211ENST00000488912 CCP110O43303 1012 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 AKR1B10O60218 316 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 MNX1P50219 401 aaPredicted RBP11.75□□□□□ -0.53
COL21A1-211ENST00000488912 GUCY2FP51841 1108 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 CYP27A1Q02318 531 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 GFPT1Q06210 699 aaPredicted RBP11.75□□□□□ -0.53
COL21A1-211ENST00000488912 TRPC3Q13507 836 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 GLRA4Q5JXX5 417 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 ZNF571Q7Z3V5 609 aaPredicted RBP11.75□□□□□ -0.53
COL21A1-211ENST00000488912 U2AF1L4Q8WU68 220 aaKnown RBP11.75□□□□□ -0.53
COL21A1-211ENST00000488912 KIF12Q96FN5 646 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 EIF3CQ99613 913 aaKnown RBP11.75□□□□□ -0.53
COL21A1-211ENST00000488912 IMPG2Q9BZV3 1241 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 CRISPLD2Q9H0B8 497 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 PLEKHA5Q9HAU0 1116 aa11.75□□□□□ -0.53
COL21A1-211ENST00000488912 ITGB3P05106 788 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 KRT19P08727 400 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 USP8P40818 1118 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 MBTPS1Q14703 1052 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 ALKAL1Q6UXT8 129 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 CD302Q8IX05 232 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 FAM71AQ8IYT1 594 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 CXorf38Q8TB03 319 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 XYLT2Q9H1B5 865 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 CHST12Q9NRB3 414 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 RNF19AQ9NV58 838 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 KLK14Q9P0G3 267 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 PCDHB2Q9Y5E7 798 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 BZW2Q9Y6E2 419 aaKnown RBP11.74□□□□□ -0.53
COL21A1-211ENST00000488912 MGEA5O60502 916 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 IPO7O95373 1038 aaKnown RBP11.74□□□□□ -0.53
COL21A1-211ENST00000488912 LCA5LO95447 670 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 SGPL1O95470 568 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 HSPA1AP0DMV8 641 aaKnown RBP11.74□□□□□ -0.53
COL21A1-211ENST00000488912 HSPA1BP0DMV9 641 aaKnown RBP11.74□□□□□ -0.53
COL21A1-211ENST00000488912 CHRM1P11229 460 aaPredicted RBP11.74□□□□□ -0.53
COL21A1-211ENST00000488912 CUL2Q13617 745 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 SGSM1Q2NKQ1 1148 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 ZNF699Q32M78 642 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 DNTTIP2Q5QJE6 756 aaKnown RBP11.74□□□□□ -0.53
COL21A1-211ENST00000488912 NYAP1Q6ZVC0 841 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 ENOSF1Q7L5Y1 443 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 NT5DC4Q86YG4 428 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 FMNL3Q8IVF7 1028 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 ANKRD7Q92527 254 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 ARMC5Q96C12 935 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms