RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 EMC7Q9NPA0 242 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 LANCL2Q9NS86 450 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 GSG1L2A8MUP6 293 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 WNT10BO00744 389 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 TEX33O43247 280 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 SRGNP10124 158 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 ALAS1P13196 640 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 ADCYAP1R1P41586 468 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 ALDH1A3P47895 512 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 SSBP2P81877 361 aaPredicted RBP4.01□□□□□ -1.77
CCDC93-209ENST00000488908 SLC10A2Q12908 348 aaPredicted RBP4.01□□□□□ -1.77
CCDC93-209ENST00000488908 PCBP1Q15365 356 aaKnown RBP eCLIP4.01□□□□□ -1.77
CCDC93-209ENST00000488908 TCEA2Q15560 299 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 FSCN1Q16658 493 aaKnown RBP4.01□□□□□ -1.77
CCDC93-209ENST00000488908 C11orf87Q6NUJ2 197 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 VWA1Q6PCB0 445 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 AMIGO2Q86SJ2 522 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 AHI1Q8N157 1196 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 PQLC1Q8N2U9 271 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 NUP133Q8WUM0 1156 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 TFAP2BQ92481 460 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 WASF1Q92558 559 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 RAX2Q96IS3 184 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 KANSL2Q9H9L4 492 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 FBXO34Q9NWN3 711 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 DPP7Q9UHL4 492 aa4.01□□□□□ -1.77
CCDC93-209ENST00000488908 AOX1Q06278 1338 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 TRIM38O00635 465 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 TP73O15350 636 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 PROM1O43490 865 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 GUCY1A2P33402 732 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 TUBA4AP68366 448 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 CDK17Q00537 523 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 BMS1Q14692 1282 aaKnown RBP4□□□□□ -1.77
CCDC93-209ENST00000488908 SEPT7Q16181 437 aaKnown RBP4□□□□□ -1.77
CCDC93-209ENST00000488908 CPEB4Q17RY0 729 aaKnown RBP eCLIP4□□□□□ -1.77
CCDC93-209ENST00000488908 SEM1Q6ZVN7 128 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 UBE3BQ7Z3V4 1068 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 FITM2Q8N6M3 262 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 CASKIN2Q8WXE0 1202 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 STON2Q8WXE9 905 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 MRFAP1L1Q96HT8 127 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 TMEM140Q9NV12 185 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 HSFX1Q9UBD0 423 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 SLC23A1Q9UHI7 598 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 EDARQ9UNE0 448 aa4□□□□□ -1.77
CCDC93-209ENST00000488908 LINC01548A6NM66 108 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 E9PSI1 815 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 ONECUT2O95948 504 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 PRR35P0CG20 571 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 CBSLP0DN79 551 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 ENPP1P22413 925 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 CBSP35520 551 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 RGS19P49795 217 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 NOMO3P69849 1222 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 GRM1Q13255 1194 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 PDCD1Q15116 288 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 NOMO1Q15155 1222 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 FAM153CQ494X1 144 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 NOMO2Q5JPE7 1267 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 ZNF626Q68DY1 528 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 HOMEZQ8IX15 550 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 SEMA6DQ8NFY4 1073 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 NINJ1Q92982 152 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 RPL36ALQ969Q0 106 aaKnown RBP3.99□□□□□ -1.77
CCDC93-209ENST00000488908 ACAP3Q96P50 834 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 INTS13Q9NVM9 706 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 CD2APQ9Y5K6 639 aa3.99□□□□□ -1.77
CCDC93-209ENST00000488908 KELP23276 732 aa3.98□□□□□ -1.77
CCDC93-209ENST00000488908 PTPRRQ15256 657 aa3.98□□□□□ -1.77
CCDC93-209ENST00000488908 SF3A1Q15459 793 aaKnown RBP3.98□□□□□ -1.77
CCDC93-209ENST00000488908 ADRM1Q16186 407 aa3.98□□□□□ -1.77
CCDC93-209ENST00000488908 C21orf62-AS1Q17RA5 79 aa3.98□□□□□ -1.77
CCDC93-209ENST00000488908 CRELD2Q6UXH1 353 aaPredicted RBP3.98□□□□□ -1.77
CCDC93-209ENST00000488908 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.98□□□□□ -1.77
CCDC93-209ENST00000488908 Q8NA96 180 aa3.98□□□□□ -1.77
CCDC93-209ENST00000488908 FATE1Q969F0 183 aa3.98□□□□□ -1.77
CCDC93-209ENST00000488908 PGBD1Q96JS3 809 aa3.98□□□□□ -1.77
CCDC93-209ENST00000488908 FEZ1Q99689 392 aa3.98□□□□□ -1.77
CCDC93-209ENST00000488908 SEMA4CQ9C0C4 833 aa3.98□□□□□ -1.77
CCDC93-209ENST00000488908 NRIP3Q9NQ35 241 aa3.98□□□□□ -1.77
CCDC93-209ENST00000488908 RBM12Q9NTZ6 932 aaKnown RBP3.98□□□□□ -1.77
CCDC93-209ENST00000488908 AJAP1Q9UKB5 411 aaPredicted RBP3.98□□□□□ -1.77
CCDC93-209ENST00000488908 ZNF521Q96K83 1311 aa3.97□□□□□ -1.77
CCDC93-209ENST00000488908 A0A1W2PS29 197 aa3.97□□□□□ -1.77
CCDC93-209ENST00000488908 GCOM1H8Y6P7 765 aaPredicted RBP3.97□□□□□ -1.77
CCDC93-209ENST00000488908 ELFN1P0C7U0 828 aa3.97□□□□□ -1.77
CCDC93-209ENST00000488908 FPR1P21462 350 aa3.97□□□□□ -1.77
CCDC93-209ENST00000488908 CCT4P50991 539 aaKnown RBP3.97□□□□□ -1.77
CCDC93-209ENST00000488908 CCT2P78371 535 aaKnown RBP3.97□□□□□ -1.77
CCDC93-209ENST00000488908 ATP13A4Q4VNC1 1196 aa3.97□□□□□ -1.77
CCDC93-209ENST00000488908 KLHL22Q53GT1 634 aa3.97□□□□□ -1.77
CCDC93-209ENST00000488908 MUM1L1Q5H9M0 696 aa3.97□□□□□ -1.77
CCDC93-209ENST00000488908 SUMO4Q6EEV6 95 aa3.97□□□□□ -1.77
CCDC93-209ENST00000488908 TOR1AIP2Q8NFQ8 470 aa3.97□□□□□ -1.77
CCDC93-209ENST00000488908 AUTS2Q8WXX7 1259 aa3.97□□□□□ -1.77
CCDC93-209ENST00000488908 TMEM125Q96AQ2 219 aa3.97□□□□□ -1.77
CCDC93-209ENST00000488908 ZNF48Q96MX3 618 aaPredicted RBP3.97□□□□□ -1.77
CCDC93-209ENST00000488908 HAPLN3Q96S86 360 aa3.97□□□□□ -1.77
CCDC93-209ENST00000488908 MYOCQ99972 504 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms