RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 USP49Q70CQ1 688 aa25.2■■□□□ 1.62
CUL4A-209ENST00000488558 MAP4K3Q8IVH8 894 aa25.2■■□□□ 1.62
CUL4A-209ENST00000488558 C18orf25Q96B23 403 aaPredicted RBP25.2■■□□□ 1.62
CUL4A-209ENST00000488558 TSPAN18Q96SJ8 248 aa25.2■■□□□ 1.62
CUL4A-209ENST00000488558 ST6GALNAC4Q9H4F1 302 aa25.2■■□□□ 1.62
CUL4A-209ENST00000488558 KCNK12Q9HB15 430 aa25.2■■□□□ 1.62
CUL4A-209ENST00000488558 CDY1Q9Y6F8 540 aa25.2■■□□□ 1.62
CUL4A-209ENST00000488558 ZDBF2Q9HCK1 2354 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 TTC26A0AVF1 554 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 I3L4J1 428 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 STX6O43752 255 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 FAM189A1O60320 539 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 CXCL8P10145 99 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 GBP2P32456 591 aaPredicted RBP25.19■■□□□ 1.62
CUL4A-209ENST00000488558 GTF2BQ00403 316 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 SEZ6Q53EL9 994 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 SLC8B1Q6J4K2 584 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 FAM173BQ6P4H8 233 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 KRI1Q8N9T8 703 aaKnown RBP25.19■■□□□ 1.62
CUL4A-209ENST00000488558 SNX21Q969T3 373 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 NXPE3Q969Y0 559 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 DUSP12Q9UNI6 340 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 NUB1Q9Y5A7 615 aa25.19■■□□□ 1.62
CUL4A-209ENST00000488558 OGTO15294 1046 aa25.18■■□□□ 1.62
CUL4A-209ENST00000488558 XYLBO75191 536 aa25.18■■□□□ 1.62
CUL4A-209ENST00000488558 HOXD11P31277 338 aaPredicted RBP25.18■■□□□ 1.62
CUL4A-209ENST00000488558 PPP2R3AQ06190 1150 aa25.18■■□□□ 1.62
CUL4A-209ENST00000488558 SLC39A14Q15043 492 aa25.18■■□□□ 1.62
CUL4A-209ENST00000488558 SPECC1Q5M775 1068 aa25.18■■□□□ 1.62
CUL4A-209ENST00000488558 VARS2Q5ST30 1063 aaKnown RBP25.18■■□□□ 1.62
CUL4A-209ENST00000488558 RSPO2Q6UXX9 243 aaPredicted RBP25.18■■□□□ 1.62
CUL4A-209ENST00000488558 SUSD3Q96L08 255 aa25.18■■□□□ 1.62
CUL4A-209ENST00000488558 MYADMQ96S97 322 aa25.18■■□□□ 1.62
CUL4A-209ENST00000488558 SMOC2Q9H3U7 446 aa25.18■■□□□ 1.62
CUL4A-209ENST00000488558 ZHX3Q9H4I2 956 aa25.18■■□□□ 1.62
CUL4A-209ENST00000488558 ZFP37Q9Y6Q3 630 aaPredicted RBP25.18■■□□□ 1.62
CUL4A-209ENST00000488558 A0A0B4J269 797 aa25.17■■□□□ 1.62
CUL4A-209ENST00000488558 ADRB2P07550 413 aa25.17■■□□□ 1.62
CUL4A-209ENST00000488558 CYP3A5P20815 502 aa25.17■■□□□ 1.62
CUL4A-209ENST00000488558 LRPAP1P30533 357 aa25.17■■□□□ 1.62
CUL4A-209ENST00000488558 NUBP1P53384 320 aa25.17■■□□□ 1.62
CUL4A-209ENST00000488558 AXDND1Q5T1B0 1012 aaPredicted RBP25.17■■□□□ 1.62
CUL4A-209ENST00000488558 SLC7A14Q8TBB6 771 aa25.17■■□□□ 1.62
CUL4A-209ENST00000488558 HVCN1Q96D96 273 aa25.17■■□□□ 1.62
CUL4A-209ENST00000488558 USP28Q96RU2 1077 aa25.17■■□□□ 1.62
CUL4A-209ENST00000488558 TUBGCP4Q9UGJ1 667 aa25.17■■□□□ 1.62
CUL4A-209ENST00000488558 H7C4K7 107 aa25.16■■□□□ 1.62
CUL4A-209ENST00000488558 XPOTO43592 962 aaKnown RBP25.16■■□□□ 1.62
CUL4A-209ENST00000488558 TBC1D4O60343 1298 aa25.16■■□□□ 1.62
CUL4A-209ENST00000488558 NASPP49321 788 aaPredicted RBP25.16■■□□□ 1.62
CUL4A-209ENST00000488558 MRPL58Q14197 206 aaKnown RBP25.16■■□□□ 1.62
CUL4A-209ENST00000488558 ZBTB6Q15916 424 aa25.16■■□□□ 1.62
CUL4A-209ENST00000488558 RRAGBQ5VZM2 374 aa25.16■■□□□ 1.62
CUL4A-209ENST00000488558 GET4Q7L5D6 327 aaPredicted RBP25.16■■□□□ 1.62
CUL4A-209ENST00000488558 ZNF461Q8TAF7 563 aa25.16■■□□□ 1.62
CUL4A-209ENST00000488558 CLIC6Q96NY7 704 aa25.16■■□□□ 1.62
CUL4A-209ENST00000488558 SEL1LQ9UBV2 794 aa25.16■■□□□ 1.62
CUL4A-209ENST00000488558 UBQLN1Q9UMX0 589 aaKnown RBP25.16■■□□□ 1.62
CUL4A-209ENST00000488558 PDGFBP01127 241 aaPredicted RBP25.15■■□□□ 1.62
CUL4A-209ENST00000488558 LAMP2P13473 410 aa25.15■■□□□ 1.62
CUL4A-209ENST00000488558 FSHRP23945 695 aa25.15■■□□□ 1.62
CUL4A-209ENST00000488558 NMT1P30419 496 aaKnown RBP25.15■■□□□ 1.62
CUL4A-209ENST00000488558 AVPR2P30518 371 aa25.15■■□□□ 1.62
CUL4A-209ENST00000488558 MCM4P33991 863 aa25.15■■□□□ 1.62
CUL4A-209ENST00000488558 TNFSF9P41273 254 aa25.15■■□□□ 1.62
CUL4A-209ENST00000488558 VCPP55072 806 aaKnown RBP25.15■■□□□ 1.62
CUL4A-209ENST00000488558 ROR1Q01973 937 aa25.15■■□□□ 1.62
CUL4A-209ENST00000488558 NHLH1Q02575 133 aa25.15■■□□□ 1.62
CUL4A-209ENST00000488558 CEBPZQ03701 1054 aaKnown RBP25.15■■□□□ 1.62
CUL4A-209ENST00000488558 ENOX2Q16206 610 aaKnown RBP25.15■■□□□ 1.62
CUL4A-209ENST00000488558 SLC39A4Q6P5W5 647 aa25.15■■□□□ 1.62
CUL4A-209ENST00000488558 CCDC73Q6ZRK6 1079 aa25.15■■□□□ 1.62
CUL4A-209ENST00000488558 CD302Q8IX05 232 aa25.15■■□□□ 1.62
CUL4A-209ENST00000488558 KIF12Q96FN5 646 aa25.15■■□□□ 1.62
CUL4A-209ENST00000488558 MSTO1Q9BUK6 570 aa25.15■■□□□ 1.62
CUL4A-209ENST00000488558 FOXD4L1Q9NU39 408 aa25.15■■□□□ 1.62
CUL4A-209ENST00000488558 ABLIM3O94929 683 aa25.14■■□□□ 1.62
CUL4A-209ENST00000488558 SV2BQ7L1I2 683 aa25.14■■□□□ 1.62
CUL4A-209ENST00000488558 GRASPQ7Z6J2 395 aaPredicted RBP25.14■■□□□ 1.62
CUL4A-209ENST00000488558 APPL2Q8NEU8 664 aa25.14■■□□□ 1.62
CUL4A-209ENST00000488558 PRSS33Q8NF86 280 aa25.14■■□□□ 1.62
CUL4A-209ENST00000488558 DDX12PQ92771 950 aa25.14■■□□□ 1.62
CUL4A-209ENST00000488558 RPF1Q9H9Y2 349 aaKnown RBP25.14■■□□□ 1.62
CUL4A-209ENST00000488558 CPSF3Q9UKF6 684 aaKnown RBP25.14■■□□□ 1.62
CUL4A-209ENST00000488558 PCDHB8Q9UN66 801 aa25.14■■□□□ 1.62
CUL4A-209ENST00000488558 ANK1P16157 1881 aa25.13■■□□□ 1.61
CUL4A-209ENST00000488558 LACTBL1A8MY62 500 aa25.13■■□□□ 1.61
CUL4A-209ENST00000488558 CCL16O15467 120 aa25.13■■□□□ 1.61
CUL4A-209ENST00000488558 PDIA4P13667 645 aaKnown RBP25.13■■□□□ 1.61
CUL4A-209ENST00000488558 GAP43P17677 238 aa25.13■■□□□ 1.61
CUL4A-209ENST00000488558 AARSP49588 968 aaKnown RBP eCLIP25.13■■□□□ 1.61
CUL4A-209ENST00000488558 PTPN5P54829 565 aa25.13■■□□□ 1.61
CUL4A-209ENST00000488558 ZBTB41Q5SVQ8 909 aa25.13■■□□□ 1.61
CUL4A-209ENST00000488558 IER5LQ5T953 404 aa25.13■■□□□ 1.61
CUL4A-209ENST00000488558 SLFN12LQ6IEE8 588 aa25.13■■□□□ 1.61
CUL4A-209ENST00000488558 ZNF280DQ6N043 979 aa25.13■■□□□ 1.61
CUL4A-209ENST00000488558 SFR1Q86XK3 245 aa25.13■■□□□ 1.61
CUL4A-209ENST00000488558 STYXL1Q9Y6J8 313 aa25.13■■□□□ 1.61
CUL4A-209ENST00000488558 WDFY4Q6ZS81 3184 aa25.13■■□□□ 1.61
CUL4A-209ENST00000488558 ARHGEF37A1IGU5 675 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms