RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 ALCAMQ13740 583 aa15.47■□□□□ 0.07
COL9A2-208ENST00000488463 CBX2Q14781 532 aaPredicted RBP15.47■□□□□ 0.07
COL9A2-208ENST00000488463 KYAT1Q16773 422 aa15.47■□□□□ 0.07
COL9A2-208ENST00000488463 RSPO2Q6UXX9 243 aaPredicted RBP15.47■□□□□ 0.07
COL9A2-208ENST00000488463 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.47■□□□□ 0.07
COL9A2-208ENST00000488463 CCDC65Q8IXS2 484 aa15.47■□□□□ 0.07
COL9A2-208ENST00000488463 DDX27Q96GQ7 796 aaKnown RBP15.47■□□□□ 0.07
COL9A2-208ENST00000488463 SPATA32Q96LK8 384 aa15.47■□□□□ 0.07
COL9A2-208ENST00000488463 ACCSQ96QU6 501 aa15.47■□□□□ 0.07
COL9A2-208ENST00000488463 LRRC27Q9C0I9 530 aa15.47■□□□□ 0.07
COL9A2-208ENST00000488463 EPHX3Q9H6B9 360 aa15.47■□□□□ 0.07
COL9A2-208ENST00000488463 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.47■□□□□ 0.07
COL9A2-208ENST00000488463 FAM13BQ9NYF5 915 aa15.47■□□□□ 0.07
COL9A2-208ENST00000488463 SERTAD1Q9UHV2 236 aa15.47■□□□□ 0.07
COL9A2-208ENST00000488463 PCDHB13Q9Y5F0 798 aa15.47■□□□□ 0.07
COL9A2-208ENST00000488463 SCN1AP35498 2009 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 A0A1B0GVL5 298 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 LOC730098B7Z3J9 87 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 PRPF6O94906 941 aaKnown RBP15.46■□□□□ 0.07
COL9A2-208ENST00000488463 ADH1AP07327 375 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 SLFN14P0C7P3 912 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 CYP3A5P20815 502 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 MATR3P43243 847 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL9A2-208ENST00000488463 ACOT2P49753 483 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 GUCY2FP51841 1108 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 WNT7BP56706 349 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 AMPD3Q01432 767 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 POU5F1Q01860 360 aaKnown RBP15.46■□□□□ 0.07
COL9A2-208ENST00000488463 ITIH3Q06033 890 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 ELAVL2Q12926 359 aaKnown RBP15.46■□□□□ 0.07
COL9A2-208ENST00000488463 CUL4BQ13620 913 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 TPRNQ4KMQ1 711 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 SLFN12LQ6IEE8 588 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 KIAA1841Q6NSI8 718 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 UNC13DQ70J99 1090 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 GRAMD1CQ8IYS0 662 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 PHF7Q9BWX1 381 aaPredicted RBP15.46■□□□□ 0.07
COL9A2-208ENST00000488463 BLZF1Q9H2G9 400 aa15.46■□□□□ 0.07
COL9A2-208ENST00000488463 AGO2Q9UKV8 859 aaKnown RBP15.46■□□□□ 0.07
COL9A2-208ENST00000488463 TGM5O43548 720 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 KLRC4O43908 158 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 TBC1D4O60343 1298 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 WEE2P0C1S8 567 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 TKTP29401 623 aaKnown RBP15.45■□□□□ 0.06
COL9A2-208ENST00000488463 AARSP49588 968 aaKnown RBP eCLIP15.45■□□□□ 0.06
COL9A2-208ENST00000488463 ASIC1P78348 528 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 PPP2R3AQ06190 1150 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 MRPL58Q14197 206 aaKnown RBP15.45■□□□□ 0.06
COL9A2-208ENST00000488463 PSMD5Q16401 504 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 RARS2Q5T160 578 aaKnown RBP15.45■□□□□ 0.06
COL9A2-208ENST00000488463 SPATA1Q5VX52 437 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 CMASQ8NFW8 434 aaPredicted RBP15.45■□□□□ 0.06
COL9A2-208ENST00000488463 ZNF507Q8TCN5 953 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 KIF12Q96FN5 646 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 PAGE5Q96GU1 130 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 TSPAN18Q96SJ8 248 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 SCAND2PQ9GZW5 306 aaPredicted RBP15.45■□□□□ 0.06
COL9A2-208ENST00000488463 GOLPH3LQ9H4A5 285 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 POMKQ9H5K3 350 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 RPF1Q9H9Y2 349 aaKnown RBP15.45■□□□□ 0.06
COL9A2-208ENST00000488463 MAN1C1Q9NR34 630 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 MTRRQ9UBK8 725 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 ATP6V1DQ9Y5K8 247 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 MYO10Q9HD67 2058 aa15.45■□□□□ 0.06
COL9A2-208ENST00000488463 DOCK8Q8NF50 2099 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 A0A1W2PQ27 194 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 A0A1W2PQ64 194 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 A0A1W2PQD8 194 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 PPEF2O14830 753 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 TGFB1I1O43294 461 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 GLUD1P00367 558 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 NFICP08651 508 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 GARTP22102 1010 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 AFMP43652 599 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 NDUFA8P51970 172 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 POSTNQ15063 836 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 FAM26FQ5R3K3 315 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 JADE1Q6IE81 842 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 GPR149Q86SP6 731 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 CEP57Q86XR8 500 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 PALB2Q86YC2 1186 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 CD302Q8IX05 232 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 TMEM87AQ8NBN3 555 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 HDAC7Q8WUI4 952 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 SCFD1Q8WVM8 642 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 POMGNT1Q8WZA1 660 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 ZNF707Q96C28 371 aaPredicted RBP15.44■□□□□ 0.06
COL9A2-208ENST00000488463 SUSD3Q96L08 255 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 PYM1Q9BRP8 204 aaKnown RBP15.44■□□□□ 0.06
COL9A2-208ENST00000488463 CBWD1Q9BRT8 395 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 RHOBTB2Q9BYZ6 727 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 ASB7Q9H672 318 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 SFXN1Q9H9B4 322 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 GDPD2Q9HCC8 539 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 UBQLN1Q9UMX0 589 aaKnown RBP15.44■□□□□ 0.06
COL9A2-208ENST00000488463 EXOC7Q9UPT5 735 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 BACE2Q9Y5Z0 518 aa15.44■□□□□ 0.06
COL9A2-208ENST00000488463 TECTAO75443 2155 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 TSC2P49815 1807 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 PVALEFA0A1B0GWK0 134 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms