RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 CENPPQ6IPU0 288 aa18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 DDX53Q86TM3 631 aaKnown RBP18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 NELFBQ8WX92 580 aa18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 DUSP9Q99956 384 aaKnown RBP18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 ZBP1Q9H171 429 aa18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 TLR9Q9NR96 1032 aa18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 ADAM28Q9UKQ2 775 aa18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 UBQLN1Q9UMX0 589 aaKnown RBP18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 LINC01565O15544 149 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 DLATP10515 647 aaKnown RBP18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 PPM1AP35813 382 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 KRT17Q04695 432 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 DPCR1Q3MIW9 517 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 C1orf220Q5T0J3 134 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 DCLRE1AQ6PJP8 1040 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 PRSS55Q6UWB4 352 aaPredicted RBP18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 TMC7Q7Z402 723 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 RNF168Q8IYW5 571 aaPredicted RBP18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 CXorf38Q8TB03 319 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 FEZF2Q8TBJ5 459 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 MFSD14AQ96MC6 490 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 MTMR12Q9C0I1 747 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 IGFLR1Q9H665 355 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 ASB7Q9H672 318 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 ENTPD7Q9NQZ7 604 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 DPP3Q9NY33 737 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 ATG2AQ2TAZ0 1938 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 ANK1P16157 1881 aa18.58■□□□□ 0.56
SHROOM1-205ENST00000488072 LRRIQ3A6PVS8 624 aaPredicted RBP18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 IL18RAPO95256 599 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 CXCL14O95715 111 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 RPL17P18621 184 aaKnown RBP18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 POU3F3P20264 500 aaPredicted RBP18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 CCNE1P24864 410 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 SNRPFP62306 86 aaKnown RBP18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 HYAL1Q12794 435 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 ADAM9Q13443 819 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 TIGD5Q53EQ6 642 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 COBLL1Q53SF7 1204 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 RTP2Q5QGT7 225 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 FAM171A1Q5VUB5 890 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 C9orf57Q5W0N0 161 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 SLC9A9Q8IVB4 645 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 C1orf127Q8N9H9 656 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 GOLGA5Q8TBA6 731 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 RSPH1Q8WYR4 309 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 SLC38A7Q9NVC3 462 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 SIX4Q9UIU6 781 aa18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 TIMM13Q9Y5L4 95 aaPredicted RBP18.57■□□□□ 0.56
SHROOM1-205ENST00000488072 CITO14578 2027 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 TRIM49P0CI25 452 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 TRIM49CP0CI26 452 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 TKTP29401 623 aaKnown RBP18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 LRPAP1P30533 357 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 PSMD6Q15008 389 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 PTPN14Q15678 1187 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 TTI2Q6NXR4 508 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 CAVIN1Q6NZI2 390 aaKnown RBP18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 CEP57Q86XR8 500 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 CD302Q8IX05 232 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 BEST2Q8NFU1 509 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 VN1R2Q8NFZ6 395 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 MAFAQ8NHW3 353 aaPredicted RBP18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 HERC2P3Q9BVR0 1158 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 INTS13Q9NVM9 706 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 CGNQ9P2M7 1197 aaKnown RBP18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 PUF60Q9UHX1 559 aaKnown RBP18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 LZTS1Q9Y250 596 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 STXBP5LQ9Y2K9 1186 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 C2CD2Q9Y426 696 aa18.56■□□□□ 0.56
SHROOM1-205ENST00000488072 ANO9A1A5B4 782 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 C2orf71A6NGG8 1288 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 PIRO00625 290 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 KIAA0391O15091 583 aaKnown RBP18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 ADAM12O43184 909 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 LILRB3O75022 631 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 LRRN2O75325 713 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 KIF20AO95235 890 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 SOD2P04179 222 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 ITGB3P05106 788 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 CTSAP10619 480 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 CYP3A5P20815 502 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 POLR2BP30876 1174 aaKnown RBP18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 NRIP1P48552 1158 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 CDR1P51861 262 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 UBE3AQ05086 875 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 PTPROQ16827 1216 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 KIAA0319Q5VV43 1072 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 RSPO2Q6UXX9 243 aaPredicted RBP18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 RBM43Q6ZSC3 357 aaKnown RBP18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 GLYCTKQ8IVS8 523 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 DHTKD1Q96HY7 919 aaPredicted RBP18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 CGRRF1Q99675 332 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 LMAN2LQ9H0V9 348 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.55■□□□□ 0.561e-16■■■■■ 250
SHROOM1-205ENST00000488072 AGAP1Q9UPQ3 857 aa18.55■□□□□ 0.56
SHROOM1-205ENST00000488072 PDCD11Q14690 1871 aaKnown RBP18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 MBD3O95983 291 aa18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 CST3P01034 146 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms