RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 ARHGEF37A1IGU5 675 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 OFD1O75665 1012 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 STAU1O95793 577 aaKnown RBP11.91□□□□□ -0.5
HDLBP-242ENST00000488013 TRIM21P19474 475 aaKnown RBP11.91□□□□□ -0.5
HDLBP-242ENST00000488013 ITGB8P26012 769 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 MLH1P40692 756 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 DLG4P78352 724 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 NCOA4Q13772 614 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 NOMO2Q5JPE7 1267 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 C1orf220Q5T0J3 134 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 PPFIBP1Q86W92 1011 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 VSTM4Q8IW00 320 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 DRC7Q8IY82 874 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 TMEM192Q8IY95 271 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 LRRC52Q8N7C0 313 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 EHBP1Q8NDI1 1231 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 ZNF397Q8NF99 534 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-242ENST00000488013 PLEKHO2Q8TD55 490 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 LINC01599Q8WXQ3 324 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 JAKMIP2Q96AA8 810 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 ZNF560Q96MR9 790 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 POP1Q99575 1024 aaKnown RBP11.91□□□□□ -0.5
HDLBP-242ENST00000488013 DNAI2Q9GZS0 605 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 NUCKS1Q9H1E3 243 aaKnown RBP11.91□□□□□ -0.5
HDLBP-242ENST00000488013 DPP3Q9NY33 737 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 GCNT4Q9P109 453 aa11.91□□□□□ -0.5
HDLBP-242ENST00000488013 NFICP08651 508 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 TBXAS1P24557 533 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-242ENST00000488013 LRPAP1P30533 357 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 PIK3CAP42336 1068 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 TUSC3Q13454 348 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 SYCP1Q15431 976 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 CBWD6Q4V339 395 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 CBWD3Q5JTY5 395 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 CBWD5Q5RIA9 395 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 CRIPAKQ8N1N5 446 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 NEK11Q8NG66 645 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 HERVK_113Q902F9 699 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 TOP1MTQ969P6 601 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 NT5C1BQ96P26 610 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 FAM193BQ96PV7 902 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-242ENST00000488013 PPP1R10Q96QC0 940 aaKnown RBP11.9□□□□□ -0.5
HDLBP-242ENST00000488013 MTMR12Q9C0I1 747 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 MMRN2Q9H8L6 949 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 VRTNQ9H8Y1 702 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 MYO6Q9UM54 1294 aa11.9□□□□□ -0.5
HDLBP-242ENST00000488013 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-242ENST00000488013 A0A1W2PQJ5 194 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 FAM163BP0C2L3 166 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 CCDC172P0C7W6 258 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 PON1P27169 355 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 TIE1P35590 1138 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 PBX1P40424 430 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 GSDMDP57764 484 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 YWHAEP62258 255 aaKnown RBP11.89□□□□□ -0.51
HDLBP-242ENST00000488013 GCNT1Q02742 428 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 RNASELQ05823 741 aaKnown RBP11.89□□□□□ -0.51
HDLBP-242ENST00000488013 CCDC173Q0VFZ6 552 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 TSR1Q2NL82 804 aaKnown RBP11.89□□□□□ -0.51
HDLBP-242ENST00000488013 EPC2Q52LR7 807 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 TDRD10Q5VZ19 366 aaKnown RBP11.89□□□□□ -0.51
HDLBP-242ENST00000488013 TRIM65Q6PJ69 517 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 EFCAB13Q8IY85 973 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 LRRC43Q8N309 656 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 C1orf127Q8N9H9 656 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 GSTCDQ8NEC7 633 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 OR5B17Q8NGF7 314 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 TAS1R2Q8TE23 839 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 ZNF516Q92618 1163 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 LPPQ93052 612 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 RNF25Q96BH1 459 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-242ENST00000488013 SLC9A7Q96T83 725 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 TMEM175Q9BSA9 504 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 INTS2Q9H0H0 1204 aaKnown RBP11.89□□□□□ -0.51
HDLBP-242ENST00000488013 KLK14Q9P0G3 267 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 APEX2Q9UBZ4 518 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 STK39Q9UEW8 545 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 SIK3Q9Y2K2 1263 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 EVPLQ92817 2033 aa11.89□□□□□ -0.51
HDLBP-242ENST00000488013 PTGESO14684 152 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
HDLBP-242ENST00000488013 TEX33O43247 280 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 NRDCO43847 1150 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 DGKIO75912 1065 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 ASS1P00966 412 aaKnown RBP11.88□□□□□ -0.51
HDLBP-242ENST00000488013 HLA-DRAP01903 254 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 KRT19P08727 400 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 SCNN1GP51170 649 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 MFAP3P55082 362 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 WDR5P61964 334 aaKnown RBP11.88□□□□□ -0.51
HDLBP-242ENST00000488013 ZNF699Q32M78 642 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 TMEM240Q5SV17 173 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 C9orf57Q5W0N0 161 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 DCLRE1AQ6PJP8 1040 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 ZNF365Q70YC5 407 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 CACNA2D4Q7Z3S7 1137 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 CNGA4Q8IV77 575 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 VWCEQ96DN2 955 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 HPDLQ96IR7 371 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 ZFP42Q96MM3 310 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms