RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 USP51Q70EK9 711 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 ADGRE4PQ86SQ3 457 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 PHYKPLQ8IUZ5 450 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 IL17DQ8TAD2 202 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 NINJ1Q92982 152 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 ZNF503Q96F45 646 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 SORCS2Q96PQ0 1159 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 GPHA2Q96T91 129 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 MTG2Q9H4K7 406 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 ZMAT4Q9H898 229 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 ADARB2Q9NS39 739 aaKnown RBP6.19□□□□□ -1.42
BRCA1-217ENST00000487825 HECAQ9UBI9 543 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-217ENST00000487825 HDAC9Q9UKV0 1011 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 ZBTB1Q9Y2K1 713 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 SH3BP1Q9Y3L3 701 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 ROCK2O75116 1388 aaKnown RBP6.18□□□□□ -1.42
BRCA1-217ENST00000487825 PRUNE2Q8WUY3 3088 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 MRC1P22897 1456 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 CDC45O75419 566 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 SLPIP03973 132 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 C1SP09871 688 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 CYP19A1P11511 503 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-217ENST00000487825 ACRV1P26436 265 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 DSG1Q02413 1049 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 MIIPQ5JXC2 388 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 TBC1D9BQ66K14 1250 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 OLFM4Q6UX06 510 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 GAREM2Q75VX8 874 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 KANSL1Q7Z3B3 1105 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 BMP8AQ7Z5Y6 402 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 CLEC14AQ86T13 490 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 DNAJC10Q8IXB1 793 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 NIM1KQ8IY84 436 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 CNBD1Q8NA66 436 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 PLA2G15Q8NCC3 412 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 JDP2Q8WYK2 163 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 PLEKHG4BQ96PX9 1271 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 PSMD1Q99460 953 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 ORAI3Q9BRQ5 295 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 GPRC5DQ9NZD1 345 aa6.18□□□□□ -1.42
BRCA1-217ENST00000487825 UBE2QL1A1L167 161 aa6.17□□□□□ -1.42
BRCA1-217ENST00000487825 DAPK3O43293 454 aa6.17□□□□□ -1.42
BRCA1-217ENST00000487825 TOX4O94842 621 aa6.17□□□□□ -1.42
BRCA1-217ENST00000487825 POU3F2P20265 443 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-217ENST00000487825 KRT40Q6A162 431 aa6.17□□□□□ -1.42
BRCA1-217ENST00000487825 IGFL4Q6B9Z1 124 aa6.17□□□□□ -1.42
BRCA1-217ENST00000487825 KIAA1841Q6NSI8 718 aa6.17□□□□□ -1.42
BRCA1-217ENST00000487825 JAZF1Q86VZ6 243 aa6.17□□□□□ -1.42
BRCA1-217ENST00000487825 KIF18BQ86Y91 864 aa6.17□□□□□ -1.42
BRCA1-217ENST00000487825 EFHBQ8N7U6 833 aa6.17□□□□□ -1.42
BRCA1-217ENST00000487825 PUS7Q96PZ0 661 aaKnown RBP6.17□□□□□ -1.42
BRCA1-217ENST00000487825 TARS2Q9BW92 718 aaKnown RBP6.17□□□□□ -1.42
BRCA1-217ENST00000487825 NCDNQ9UBB6 729 aa6.17□□□□□ -1.42
BRCA1-217ENST00000487825 SYNPO2Q9UMS6 1093 aa6.17□□□□□ -1.42
BRCA1-217ENST00000487825 A0A0A6YYJ9 748 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 H0YGN5 161 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 CYR61O00622 381 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 FYB1O15117 783 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 TGM5O43548 720 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 PCDH8O95206 1070 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 NPR1P16066 1061 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 CD40P25942 277 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 KPNA1P52294 538 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-217ENST00000487825 ADAM8P78325 824 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 SMAD3P84022 425 aaKnown RBP6.16□□□□□ -1.42
BRCA1-217ENST00000487825 PTH1RQ03431 593 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 KLF10Q13118 480 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 CRHR2Q13324 411 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 LSM12Q3MHD2 195 aaKnown RBP6.16□□□□□ -1.42
BRCA1-217ENST00000487825 PASD1Q8IV76 773 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 ZZZ3Q8IYH5 903 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 NOL10Q9BSC4 688 aaKnown RBP6.16□□□□□ -1.42
BRCA1-217ENST00000487825 PITHD1Q9GZP4 211 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-217ENST00000487825 HAPLN2Q9GZV7 340 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 GBA2Q9HCG7 927 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-217ENST00000487825 IL23AQ9NPF7 189 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 RCAN3Q9UKA8 241 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 GIT1Q9Y2X7 761 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 CDHR2Q9BYE9 1310 aa6.16□□□□□ -1.42
BRCA1-217ENST00000487825 DDX60Q8IY21 1712 aaKnown RBP6.16□□□□□ -1.42
BRCA1-217ENST00000487825 SIPA1L3O60292 1781 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-217ENST00000487825 ZNF646O15015 1829 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-217ENST00000487825 TAF1P21675 1872 aa6.15□□□□□ -1.42
BRCA1-217ENST00000487825 KLRG2A4D1S0 409 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-217ENST00000487825 LCHNA4D1U4 455 aa6.15□□□□□ -1.42
BRCA1-217ENST00000487825 ELL2O00472 640 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-217ENST00000487825 OPHN1O60890 802 aa6.15□□□□□ -1.42
BRCA1-217ENST00000487825 EN2P19622 333 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-217ENST00000487825 SCNN1BP51168 640 aa6.15□□□□□ -1.42
BRCA1-217ENST00000487825 HMGA2P52926 109 aa6.15□□□□□ -1.42
BRCA1-217ENST00000487825 EIF5P55010 431 aaKnown RBP6.15□□□□□ -1.42
BRCA1-217ENST00000487825 RRP1BQ14684 758 aaKnown RBP6.15□□□□□ -1.42
BRCA1-217ENST00000487825 SART3Q15020 963 aaKnown RBP6.15□□□□□ -1.42
BRCA1-217ENST00000487825 SEPT7Q16181 437 aaKnown RBP6.15□□□□□ -1.42
BRCA1-217ENST00000487825 FAM111BQ6SJ93 734 aa6.15□□□□□ -1.42
BRCA1-217ENST00000487825 ZNF496Q96IT1 587 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-217ENST00000487825 TCF25Q9BQ70 676 aa6.15□□□□□ -1.42
BRCA1-217ENST00000487825 MRIQ9BWK5 157 aa6.15□□□□□ -1.42
BRCA1-217ENST00000487825 PRO3102Q9H379 93 aa6.15□□□□□ -1.42
BRCA1-217ENST00000487825 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms