RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 DNAJC25Q9H1X3 360 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 THAP9Q9H5L6 903 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 INTS13Q9NVM9 706 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 DPP3Q9NY33 737 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 SPG21Q9NZD8 308 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 HCSTQ9UBK5 93 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 ARMCX3Q9UH62 379 aaPredicted RBP14.41□□□□□ -0.1
COL4A6-207ENST00000487645 PLXNA4Q9HCM2 1894 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 TMEM189-UBE2V1I3L0A0 370 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 STX10O60499 249 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 B4GALT3O60512 393 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 TNNC2P02585 160 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 DLATP10515 647 aaKnown RBP14.4□□□□□ -0.1
COL4A6-207ENST00000487645 TNNI1P19237 187 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 PAX3P23760 479 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 CTNNB1P35222 781 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 TFAMQ00059 246 aaKnown RBP14.4□□□□□ -0.1
COL4A6-207ENST00000487645 PLCB3Q01970 1234 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 UPP1Q16831 310 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 EPC2Q52LR7 807 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 SLC39A11Q8N1S5 342 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 PLEKHO2Q8TD55 490 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 ZNF516Q92618 1163 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 ANKRD36BP1Q96IX9 119 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 POP1Q99575 1024 aaKnown RBP14.4□□□□□ -0.1
COL4A6-207ENST00000487645 C17orf80Q9BSJ5 609 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 ZNF576Q9H609 170 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 STK39Q9UEW8 545 aa14.4□□□□□ -0.1
COL4A6-207ENST00000487645 ANO9A1A5B4 782 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 CASTOR2A6NHX0 329 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 LRRIQ3A6PVS8 624 aaPredicted RBP14.39□□□□□ -0.11
COL4A6-207ENST00000487645 TULP1O00294 542 aaPredicted RBP14.39□□□□□ -0.11
COL4A6-207ENST00000487645 SOX1O00570 391 aaPredicted RBP14.39□□□□□ -0.11
COL4A6-207ENST00000487645 TMEM191BP0C7N4 346 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 GTF2H1P32780 548 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 CLCNKBP51801 687 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 KRT17Q04695 432 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 CCDC40Q4G0X9 1142 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 IRF2BP1Q8IU81 584 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 FAM114A1Q8IWE2 563 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 FBXO22Q8NEZ5 403 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 IGSF21Q96ID5 467 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 C11orf84Q9BUA3 381 aaPredicted RBP14.39□□□□□ -0.11
COL4A6-207ENST00000487645 GOLGA2P5Q9HBQ8 144 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 TUBGCP4Q9UGJ1 667 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 ITGA11Q9UKX5 1188 aa14.39□□□□□ -0.11
COL4A6-207ENST00000487645 SMTNL1A8MU46 457 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 NT5C1B-RDH14C9J2C7 533 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 H3BNC9 293 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 PODXLO00592 558 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 PIRO00625 290 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 TADA2AO75478 443 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 FGF18O76093 207 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 B3GAT3O94766 335 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 C4BPAP04003 597 aaKnown RBP14.38□□□□□ -0.11
COL4A6-207ENST00000487645 ZNF165P49910 485 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 DLG4P78352 724 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 RBP5P82980 135 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 MYL5Q02045 173 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 UBE3AQ05086 875 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 C1orf220Q5T0J3 134 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 C9orf57Q5W0N0 161 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 LRSAM1Q6UWE0 723 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 TRAPPC11Q7Z392 1133 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 TRIM59Q8IWR1 403 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 C1orf127Q8N9H9 656 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 KLHL23Q8NBE8 558 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 OR5B17Q8NGF7 314 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 TMEM169Q96HH4 297 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 PAAF1Q9BRP4 392 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 ANP32EQ9BTT0 268 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 MTMR12Q9C0I1 747 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 PUF60Q9UHX1 559 aaKnown RBP14.38□□□□□ -0.11
COL4A6-207ENST00000487645 ADAM28Q9UKQ2 775 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 LZTS1Q9Y250 596 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 NFE2L3Q9Y4A8 694 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 PTPRJQ12913 1337 aa14.38□□□□□ -0.11
COL4A6-207ENST00000487645 TRAPPC3O43617 180 aa14.37□□□□□ -0.11
COL4A6-207ENST00000487645 EFEMP2O95967 443 aa14.37□□□□□ -0.11
COL4A6-207ENST00000487645 PBX3P40426 434 aa14.37□□□□□ -0.11
COL4A6-207ENST00000487645 ZNF445P59923 1031 aa14.37□□□□□ -0.11
COL4A6-207ENST00000487645 ZACNQ401N2 412 aa14.37□□□□□ -0.11
COL4A6-207ENST00000487645 C15orf39Q6ZRI6 1047 aa14.37□□□□□ -0.11
COL4A6-207ENST00000487645 SV2AQ7L0J3 742 aa14.37□□□□□ -0.11
COL4A6-207ENST00000487645 DDX53Q86TM3 631 aaKnown RBP14.37□□□□□ -0.11
COL4A6-207ENST00000487645 LRRC52Q8N7C0 313 aa14.37□□□□□ -0.11
COL4A6-207ENST00000487645 CXorf38Q8TB03 319 aa14.37□□□□□ -0.11
COL4A6-207ENST00000487645 SPPL3Q8TCT6 385 aa14.37□□□□□ -0.11
COL4A6-207ENST00000487645 ARNTL2Q8WYA1 636 aa14.37□□□□□ -0.11
COL4A6-207ENST00000487645 LRCH3Q96II8 777 aa14.37□□□□□ -0.11
COL4A6-207ENST00000487645 MAGEC2Q9UBF1 373 aaPredicted RBP14.37□□□□□ -0.11
COL4A6-207ENST00000487645 CACNG4Q9UBN1 327 aa14.37□□□□□ -0.11
COL4A6-207ENST00000487645 PRG3Q9Y2Y8 225 aaPredicted RBP14.37□□□□□ -0.11
COL4A6-207ENST00000487645 R3HCC1Q9Y3T6 440 aaKnown RBP14.37□□□□□ -0.11
COL4A6-207ENST00000487645 PMM2O15305 246 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 PHACTR2O75167 634 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 KIF4AO95239 1232 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 CST3P01034 146 aaPredicted RBP14.36□□□□□ -0.11
COL4A6-207ENST00000487645 ITGB3P05106 788 aa14.36□□□□□ -0.11
COL4A6-207ENST00000487645 ITGB1P05556 798 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms