RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, human

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-C-208	ENST00000487245	FSCN2	O14926	492 aa		27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	ATMIN	O43313	823 aa	Predicted RBP	27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	SORBS3	O60504	671 aa		27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	SHBG	P04278	402 aa		27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	RARA	P10276	462 aa		27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	TNNI1	P19237	187 aa		27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	HIRA	P54198	1017 aa	Predicted RBP	27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	CNTN2	Q02246	1040 aa		27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	ADCY2	Q08462	1091 aa		27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	FAM160B1	Q5W0V3	765 aa		27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	SEPT14	Q6ZU15	432 aa		27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	CNPY4	Q8N129	248 aa		27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	ASAP3	Q8TDY4	903 aa		27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	UPF1	Q92900	1129 aa	Known RBP eCLIP	27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	LRRC4C	Q9HCJ2	640 aa		27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	SNCAIP	Q9Y6H5	919 aa		27.89	■■■□□ 2.05
HLA-C-208	ENST00000487245	HLA-DRA	P01903	254 aa		27.88	■■■□□ 2.05
HLA-C-208	ENST00000487245	RARG	P13631	454 aa		27.88	■■■□□ 2.05
HLA-C-208	ENST00000487245	NEDD9	Q14511	834 aa		27.88	■■■□□ 2.05
HLA-C-208	ENST00000487245	PLCB4	Q15147	1175 aa		27.88	■■■□□ 2.05
HLA-C-208	ENST00000487245	C6orf118	Q5T5N4	469 aa		27.88	■■■□□ 2.05
HLA-C-208	ENST00000487245	LRRIQ4	A6NIV6	560 aa		27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	AGT	P01019	485 aa		27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	ERMARD	Q5T6L9	678 aa		27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	CEP89	Q96ST8	783 aa		27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	PI4K2A	Q9BTU6	479 aa		27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	DDX20	Q9UHI6	824 aa	Known RBP	27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	SI	P14410	1827 aa		27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	TGFB3	P10600	412 aa		27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	EDNRB	P24530	442 aa		27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	MMP13	P45452	471 aa		27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	KCTD19	Q17RG1	926 aa	Predicted RBP	27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	MMS22L	Q6ZRQ5	1243 aa		27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	SUGP1	Q8IWZ8	645 aa	Known RBP	27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	KAT2B	Q92831	832 aa		27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	XPO6	Q96QU8	1125 aa	Known RBP	27.87	■■■□□ 2.05
HLA-C-208	ENST00000487245	FAM170A	A1A519	330 aa		27.86	■■■□□ 2.05
HLA-C-208	ENST00000487245	UNG	P13051	313 aa	Predicted RBP	27.86	■■■□□ 2.05
HLA-C-208	ENST00000487245	PIK3CA	P42336	1068 aa		27.86	■■■□□ 2.05
HLA-C-208	ENST00000487245	NLRP11	P59045	1033 aa	Known RBP	27.86	■■■□□ 2.05
HLA-C-208	ENST00000487245	VGLL4	Q14135	290 aa		27.86	■■■□□ 2.05
HLA-C-208	ENST00000487245	TNFAIP8L3	Q5GJ75	292 aa		27.86	■■■□□ 2.05
HLA-C-208	ENST00000487245	PPP1R2P3	Q6NXS1	205 aa		27.86	■■■□□ 2.05
HLA-C-208	ENST00000487245	MAIP1	Q8WWC4	291 aa		27.86	■■■□□ 2.05
HLA-C-208	ENST00000487245	GSTTP1	A0A1W2PQM5	241 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	TCRBV7S2A1N4T	A0A589	114 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	UBA1	P22314	1058 aa	Known RBP	27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	PRKG1	Q13976	671 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	SLC29A2	Q14542	456 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	TARBP2	Q15633	366 aa	Known RBP	27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	TRIM72	Q6ZMU5	477 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	SYDE1	Q6ZW31	735 aa	Predicted RBP	27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	CCDC105	Q8IYK2	499 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	CGRRF1	Q99675	332 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	STMN4	Q9H169	189 aa	Predicted RBP	27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	RBAK	Q9NYW8	714 aa	Predicted RBP	27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	WHRN	Q9P202	907 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	CHORDC1	Q9UHD1	332 aa	Predicted RBP	27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	CSAD	Q9Y600	493 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245		A0A0B4J269	797 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	ECEL1	O95672	775 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	ZNF568	Q3ZCX4	644 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	TDRD10	Q5VZ19	366 aa	Known RBP	27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	CRELD2	Q6UXH1	353 aa	Predicted RBP	27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	MCOLN2	Q8IZK6	566 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	ZNF526	Q8TF50	670 aa	Predicted RBP	27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	BTBD6	Q96KE9	485 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245	MSTO1	Q9BUK6	570 aa		27.85	■■■□□ 2.05
HLA-C-208	ENST00000487245		A0A0G2JMZ2	1700 aa		27.84	■■■□□ 2.05
HLA-C-208	ENST00000487245	FARP2	O94887	1054 aa	Predicted RBP	27.84	■■■□□ 2.05
HLA-C-208	ENST00000487245	DRD4	P21917	467 aa		27.84	■■■□□ 2.05
HLA-C-208	ENST00000487245	SLC1A1	P43005	524 aa		27.84	■■■□□ 2.05
HLA-C-208	ENST00000487245	TREML2	Q5T2D2	321 aa		27.84	■■■□□ 2.05
HLA-C-208	ENST00000487245	TRMT10C	Q7L0Y3	403 aa	Known RBP	27.84	■■■□□ 2.05
HLA-C-208	ENST00000487245	CPNE8	Q86YQ8	564 aa		27.84	■■■□□ 2.05
HLA-C-208	ENST00000487245	P3H4	Q92791	437 aa		27.84	■■■□□ 2.05
HLA-C-208	ENST00000487245	FAM167A	Q96KS9	214 aa		27.84	■■■□□ 2.05
HLA-C-208	ENST00000487245	MPHOSPH6	Q99547	160 aa	Known RBP	27.84	■■■□□ 2.05
HLA-C-208	ENST00000487245	SEMA4A	Q9H3S1	761 aa		27.84	■■■□□ 2.05
HLA-C-208	ENST00000487245	ACTR5	Q9H9F9	607 aa	Predicted RBP	27.84	■■■□□ 2.05
HLA-C-208	ENST00000487245	BTBD7	Q9P203	1132 aa		27.84	■■■□□ 2.05
HLA-C-208	ENST00000487245	RIPK2	O43353	540 aa		27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	POTEJ	P0CG39	1038 aa		27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	TBXAS1	P24557	533 aa	Predicted RBP	27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	MAPK4	P31152	587 aa		27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	MAN1A1	P33908	653 aa		27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	ACOT2	P49753	483 aa		27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	STAT5B	P51692	787 aa		27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	AP3M2	P53677	418 aa		27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	ACTN3	Q08043	901 aa	Predicted RBP	27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	FSTL1	Q12841	308 aa		27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	SEPT1	Q8WYJ6	367 aa		27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	SEC16B	Q96JE7	1060 aa		27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	ROPN1B	Q9BZX4	212 aa	Predicted RBP	27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	SPATC1L	Q9H0A9	340 aa		27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	ROPN1	Q9HAT0	212 aa	Predicted RBP	27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	CAPN7	Q9Y6W3	813 aa		27.83	■■■□□ 2.05
HLA-C-208	ENST00000487245	RGS16	O15492	202 aa	Predicted RBP	27.83	■■■□□ 2.04
HLA-C-208	ENST00000487245	ADCY3	O60266	1144 aa		27.83	■■■□□ 2.04
HLA-C-208	ENST00000487245	PTP4A2	Q12974	167 aa		27.83	■■■□□ 2.04

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