RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 GRM5P41594 1212 aa21.35■■□□□ 1.01
SMPDL3A-202ENST00000487215 MTAPQ13126 283 aa21.35■■□□□ 1.01
SMPDL3A-202ENST00000487215 GRM2Q14416 872 aa21.35■■□□□ 1.01
SMPDL3A-202ENST00000487215 ECM1Q16610 540 aa21.35■■□□□ 1.01
SMPDL3A-202ENST00000487215 XKR4Q5GH76 650 aa21.35■■□□□ 1.01
SMPDL3A-202ENST00000487215 KIFAP3Q92845 792 aa21.35■■□□□ 1.01
SMPDL3A-202ENST00000487215 TCEAL4Q96EI5 215 aa21.35■■□□□ 1.01
SMPDL3A-202ENST00000487215 CORO1BQ9BR76 489 aa21.35■■□□□ 1.01
SMPDL3A-202ENST00000487215 CDT1Q9H211 546 aa21.35■■□□□ 1.01
SMPDL3A-202ENST00000487215 BHMT2Q9H2M3 363 aa21.35■■□□□ 1.01
SMPDL3A-202ENST00000487215 NCOR2Q9Y618 2525 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 K7ERI5 159 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 PODXLO00592 558 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 TBC1D4O60343 1298 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 ATF2P15336 505 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 MUTP22033 750 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 YARSP54577 528 aaKnown RBP21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 ARPP19P56211 112 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 GUCY1B3Q02153 619 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 ST3GAL1Q11201 340 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 ZNF174Q15697 407 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 FAM78AQ5JUQ0 283 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 HAUS3Q68CZ6 603 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 ALKAL1Q6UXT8 129 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 ZNF687Q8N1G0 1237 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 SECISBP2LQ93073 1101 aaKnown RBP21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 CCDC94Q9BW85 323 aaPredicted RBP21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 CYP4F11Q9HBI6 524 aa21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 TOPORSQ9NS56 1045 aaPredicted RBP21.34■■□□□ 1.01
SMPDL3A-202ENST00000487215 PHLPP2Q6ZVD8 1323 aa21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 NRG2O14511 850 aaPredicted RBP21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 SYN3O14994 580 aa21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 SEC24AO95486 1093 aa21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 CCR2P41597 374 aa21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 OSTNP61366 133 aa21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 ORC2Q13416 577 aaPredicted RBP21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 SAFBQ15424 915 aaKnown RBP eCLIP21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 ZNF568Q3ZCX4 644 aa21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 TCEAL8Q8IYN2 117 aa21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 ZMAT2Q96NC0 199 aaKnown RBP21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 ACO2Q99798 780 aaKnown RBP21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 BRD9Q9H8M2 597 aa21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 ZFP14Q9HCL3 533 aa21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 SLC38A7Q9NVC3 462 aa21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 NDRG2Q9UN36 371 aaKnown RBP21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 INSL5Q9Y5Q6 135 aa21.33■■□□□ 1.01
SMPDL3A-202ENST00000487215 ZNF197O14709 1029 aa21.32■■□□□ 1
SMPDL3A-202ENST00000487215 MICAL2O94851 1124 aa21.32■■□□□ 1
SMPDL3A-202ENST00000487215 TDGF1P13385 188 aa21.32■■□□□ 1
SMPDL3A-202ENST00000487215 SDHBP21912 280 aa21.32■■□□□ 1
SMPDL3A-202ENST00000487215 CCT6AP40227 531 aaKnown RBP21.32■■□□□ 1
SMPDL3A-202ENST00000487215 ATXN1P54253 815 aaKnown RBP21.32■■□□□ 1
SMPDL3A-202ENST00000487215 MRPL58Q14197 206 aaKnown RBP21.32■■□□□ 1
SMPDL3A-202ENST00000487215 PDZD4Q76G19 769 aaPredicted RBP21.32■■□□□ 1
SMPDL3A-202ENST00000487215 ASB16Q96NS5 453 aa21.32■■□□□ 1
SMPDL3A-202ENST00000487215 TRMT61BQ9BVS5 477 aaKnown RBP21.32■■□□□ 1
SMPDL3A-202ENST00000487215 FAM126AQ9BYI3 521 aaPredicted RBP21.32■■□□□ 1
SMPDL3A-202ENST00000487215 CHRDQ9H2X0 955 aa21.32■■□□□ 1
SMPDL3A-202ENST00000487215 PTPRHQ9HD43 1115 aa21.32■■□□□ 1
SMPDL3A-202ENST00000487215 FBXL5Q9UKA1 691 aa21.32■■□□□ 1
SMPDL3A-202ENST00000487215 COL4A2P08572 1712 aa21.32■■□□□ 1
SMPDL3A-202ENST00000487215 H7C4K7 107 aa21.31■■□□□ 1
SMPDL3A-202ENST00000487215 MAN2B1O00754 1011 aa21.31■■□□□ 1
SMPDL3A-202ENST00000487215 TGM1P22735 817 aa21.31■■□□□ 1
SMPDL3A-202ENST00000487215 PEX3P56589 373 aa21.31■■□□□ 1
SMPDL3A-202ENST00000487215 LMNB2Q03252 620 aa21.31■■□□□ 1
SMPDL3A-202ENST00000487215 USP18Q9UMW8 372 aa21.31■■□□□ 1
SMPDL3A-202ENST00000487215 KIAA1024Q9UPX6 916 aa21.31■■□□□ 1
SMPDL3A-202ENST00000487215 NUB1Q9Y5A7 615 aa21.31■■□□□ 1
SMPDL3A-202ENST00000487215 TRIP11Q15643 1979 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 CCDC169A6NNP5 214 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 PRR5-ARHGAP8B1AHC4 643 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 NEFLP07196 543 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 KCNE1P15382 129 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 NPTX2P47972 431 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 ARHGAP8P85298 464 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 CTXN3Q4LDR2 81 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 TTC38Q5R3I4 469 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 TPGS2Q68CL5 300 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 VITQ6UXI7 678 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 TAS1R3Q7RTX0 852 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 MAP4K3Q8IVH8 894 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 HS6ST3Q8IZP7 471 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 IRF7Q92985 503 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 C18orf25Q96B23 403 aaPredicted RBP21.3■■□□□ 1
SMPDL3A-202ENST00000487215 ZSWIM3Q96MP5 696 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 CNTNAP3BQ96NU0 1288 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 TARS2Q9BW92 718 aaKnown RBP21.3■■□□□ 1
SMPDL3A-202ENST00000487215 MRPL4Q9BYD3 311 aaKnown RBP21.3■■□□□ 1
SMPDL3A-202ENST00000487215 CNTNAP3Q9BZ76 1288 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 ZNF334Q9HCZ1 680 aaPredicted RBP21.3■■□□□ 1
SMPDL3A-202ENST00000487215 PARD6AQ9NPB6 346 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 DDX19AQ9NUU7 478 aaKnown RBP21.3■■□□□ 1
SMPDL3A-202ENST00000487215 CNTN3Q9P232 1028 aa21.3■■□□□ 1
SMPDL3A-202ENST00000487215 CDV3Q9UKY7 258 aaKnown RBP21.3■■□□□ 1
SMPDL3A-202ENST00000487215 ABLIM1O14639 778 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 MEFVO15553 781 aaPredicted RBP21.29■■□□□ 1
SMPDL3A-202ENST00000487215 MOSPD3O75425 235 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 PSMC3P17980 439 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 GDI1P31150 447 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms