RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 NXF3Q9H4D5 531 aaKnown RBP13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 PRORYQ9H606 182 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 CYP4F11Q9HBI6 524 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 MTRRQ9UBK8 725 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 PARP2Q9UGN5 583 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 EBF1Q9UH73 591 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 TRABD2BA6NFA1 517 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 DPYSL4O14531 572 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 CHMP2AO43633 222 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 SH3BP5O60239 455 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 CD59P13987 128 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 SREBF1P36956 1147 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 HNRNPDQ14103 355 aaKnown RBP13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 MAPK6Q16659 721 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 IQCEQ6IPM2 695 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 CWC27Q6UX04 472 aaKnown RBP13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 SRGAP1Q7Z6B7 1085 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 C11orf74Q86VG3 221 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 TMEFF1Q8IYR6 380 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 ELMOD1Q8N336 334 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 FAM181AQ8N9Y4 354 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 RPLP0P6Q8NHW5 317 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 ZNF512Q96ME7 567 aaPredicted RBP13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 ARID3AQ99856 593 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 LZTS2Q9BRK4 669 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 NIFKQ9BYG3 293 aaKnown RBP13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 TRIM6Q9C030 488 aaPredicted RBP13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 RIC8AQ9NPQ8 531 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 DKK4Q9UBT3 224 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 COL4A3BPQ9Y5P4 624 aa13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 ATXN2Q99700 1313 aaKnown RBP13.57□□□□□ -0.24
ATPAF1-205ENST00000487193 CAPN8A6NHC0 703 aa13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 DDX11L8A8MPP1 907 aa13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 MAFO75444 373 aaPredicted RBP13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 ERLIN2O94905 339 aa13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 SEC24AO95486 1093 aa13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 SDSP20132 328 aa13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 DMC1Q14565 340 aa13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 ARHGAP29Q52LW3 1261 aa13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 TMEM196Q5HYL7 178 aa13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 SLCO6A1Q86UG4 719 aa13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 ZNF461Q8TAF7 563 aa13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 FCRL3Q96P31 734 aaPredicted RBP13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 POLMQ9NP87 494 aaPredicted RBP13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 CIZ1Q9ULV3 898 aaPredicted RBP13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 SALL3Q9BXA9 1300 aa13.56□□□□□ -0.24
ATPAF1-205ENST00000487193 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 WISP1O95388 367 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 NTRK1P04629 796 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 CALM1P0DP23 149 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 CALM2P0DP24 149 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 CALM3P0DP25 149 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 IGFBP6P24592 240 aaPredicted RBP13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 NAPAP54920 295 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 ELAVL2Q12926 359 aaKnown RBP13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 TUSC3Q13454 348 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 SART3Q15020 963 aaKnown RBP13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 ITPRIPL2Q3MIP1 535 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 NOTUMQ6P988 496 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 SLC23A3Q6PIS1 610 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 TOGARAM2Q6ZUX3 1019 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 SYT12Q8IV01 421 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 ARID3BQ8IVW6 561 aaPredicted RBP13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 HACE1Q8IYU2 909 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 ZNF654Q8IZM8 581 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 SHKBP1Q8TBC3 707 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 PRPF31Q8WWY3 499 aaKnown RBP13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 DSCC1Q9BVC3 393 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 GPR88Q9GZN0 384 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 CSRNP2Q9H175 543 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 FBRSL1Q9HCM7 1045 aaKnown RBP13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 CEP72Q9P209 647 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 APOBEC2Q9Y235 224 aaKnown RBP13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 PI4KAP42356 2102 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 ZMYM2Q9UBW7 1377 aa13.55□□□□□ -0.24
ATPAF1-205ENST00000487193 TSPAN1O60635 241 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 RXRAP19793 462 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 FGFR3P22607 806 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 U2AF2P26368 475 aaKnown RBP eCLIP13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 PTGER3P43115 390 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 GNAQP50148 359 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 ADCY7P51828 1080 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 ROR1Q01973 937 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 GFPT1Q06210 699 aaPredicted RBP13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 PSMD2Q13200 908 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 PRR16Q569H4 304 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 XKR3Q5GH77 459 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 STXBP5Q5T5C0 1151 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 JAKMIP3Q5VZ66 844 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 WWC2Q6AWC2 1192 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 SYT13Q7L8C5 426 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 TTC30AQ86WT1 665 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 CDR2LQ86X02 465 aaPredicted RBP13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 MINDY1Q8N5J2 469 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 TSTD1Q8NFU3 115 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 TMEM143Q96AN5 459 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 MAP3K14Q99558 947 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 ASAH2Q9NR71 780 aa13.54□□□□□ -0.24
ATPAF1-205ENST00000487193 INSL5Q9Y5Q6 135 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms