RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 LRRC8CQ8TDW0 803 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 PPP1R12AO14974 1030 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-211ENST00000486901 IVDP26440 423 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 SSTR1P30872 391 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 PTDSS1P48651 473 aaKnown RBP13.15□□□□□ -0.3
HSPG2-211ENST00000486901 ZBTB16Q05516 673 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 PPP2R5EQ16537 467 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 LRRC36Q1X8D7 754 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 KHDC1Q4VXA5 237 aaKnown RBP13.15□□□□□ -0.3
HSPG2-211ENST00000486901 ANO7Q6IWH7 933 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 TRMT10CQ7L0Y3 403 aaKnown RBP13.15□□□□□ -0.3
HSPG2-211ENST00000486901 MIER3Q7Z3K6 550 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 XXYLT1Q8NBI6 393 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 RFWD2Q8NHY2 731 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 MKL1Q969V6 931 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 SERPINB12Q96P63 405 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 CYTH2Q99418 400 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 GLIS2Q9BZE0 524 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-211ENST00000486901 DNAJC5Q9H3Z4 198 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 FAM47DPA6NHR8 397 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 PEX11AO75192 247 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 KRT4P19013 534 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 STRN3Q13033 797 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 AP3B2Q13367 1082 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 MTFR1Q15390 333 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 Q4G0T1 1027 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 C11orf63Q6NUN7 778 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 LVRNQ6Q4G3 990 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 CD101Q93033 1021 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 NACC1Q96RE7 527 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 DNPEPQ9ULA0 475 aa13.15□□□□□ -0.3
HSPG2-211ENST00000486901 DIS3Q9Y2L1 958 aaKnown RBP13.15□□□□□ -0.3
HSPG2-211ENST00000486901 KRT36O76013 467 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 MAP3K6O95382 1288 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 ATP4AP20648 1035 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 SLC8A3P57103 927 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 SMTNL2Q2TAL5 461 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 TTC7BQ86TV6 843 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 ZC3H18Q86VM9 953 aaKnown RBP13.14□□□□□ -0.31
HSPG2-211ENST00000486901 MAB21L3Q8N8X9 362 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 TBC1D22AQ8WUA7 517 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 PSPC1Q8WXF1 523 aaKnown RBP13.14□□□□□ -0.31
HSPG2-211ENST00000486901 TMEM121Q9BTD3 319 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 DCLK3Q9C098 648 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 KIAA1586Q9HCI6 787 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 SPATS2LQ9NUQ6 558 aaKnown RBP13.14□□□□□ -0.31
HSPG2-211ENST00000486901 ZFATQ9P243 1243 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 MARCOQ9UEW3 520 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-211ENST00000486901 PSMD10O75832 226 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 UBTFL6P0CB48 400 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-211ENST00000486901 ZCCHC18P0CG32 403 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 KITP10721 976 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 GNAT1P11488 350 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 ALAS1P13196 640 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 PECAM1P16284 738 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-211ENST00000486901 RIPK1Q13546 671 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 SNRNP35Q16560 246 aaKnown RBP13.14□□□□□ -0.31
HSPG2-211ENST00000486901 PLEKHG4Q58EX7 1191 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 TXNRD3NBQ6F5E7 133 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 FOXR2Q6PJQ5 311 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 BTNL9Q6UXG8 535 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 ASRGL1Q7L266 308 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 BICD1Q96G01 975 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 AGBL1Q96MI9 1066 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 FAM213AQ9BRX8 229 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 MKNK1Q9BUB5 465 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 TCEAL9Q9UHQ7 104 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 A0A1B0GVG6 124 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 CDH16O75309 829 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 T-ENOLP0DO92 83 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 NOVP48745 357 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 ARSEP51690 589 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 UGCGQ16739 394 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 LRRC6Q86X45 466 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 SLC25A41Q8N5S1 370 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 CRYGNQ8WXF5 182 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 RBM17Q96I25 401 aaKnown RBP13.14□□□□□ -0.31
HSPG2-211ENST00000486901 POLR3CQ9BUI4 534 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-211ENST00000486901 DMAC2Q9NW81 257 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 NEU2Q9Y3R4 380 aa13.14□□□□□ -0.31
HSPG2-211ENST00000486901 EIF2AK2P19525 551 aaKnown RBP13.13□□□□□ -0.31
HSPG2-211ENST00000486901 GBP1P32455 592 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 IRX4P78413 519 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 PDIA2Q13087 525 aaKnown RBP13.13□□□□□ -0.31
HSPG2-211ENST00000486901 PRKG1Q13976 671 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 CEP55Q53EZ4 464 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 STXBP4Q6ZWJ1 553 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 MAGEB18Q96M61 343 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 MAK16Q9BXY0 300 aaKnown RBP13.13□□□□□ -0.31
HSPG2-211ENST00000486901 LARSQ9P2J5 1176 aaKnown RBP13.13□□□□□ -0.31
HSPG2-211ENST00000486901 FAM198AQ9UFP1 575 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 PRKAG3Q9UGI9 489 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 KCNG1Q9UIX4 513 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 ZFP69BQ9UJL9 534 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 CENPFP49454 3210 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 NAV1Q8NEY1 1877 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 ITIH2P19823 946 aa13.13□□□□□ -0.31
HSPG2-211ENST00000486901 RPL7AP62424 266 aaKnown RBP13.13□□□□□ -0.31
HSPG2-211ENST00000486901 RCN2Q14257 317 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms