RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 TTYH3Q9C0H2 523 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 VIPAS39Q9H9C1 493 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 EFCC1Q9HA90 598 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 GINM1Q9NU53 330 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 PDE4DIPQ5VU43 2346 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 ASB14A6NK59 587 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 MAP3K6O95382 1288 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 KRT10P13645 584 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 FAM47EQ6ZV65 393 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 LNX1Q8TBB1 728 aaPredicted RBP14.04□□□□□ -0.16
HMGN1-216ENST00000486741 SCFD2Q8WU76 684 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 KRT35Q92764 455 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 CARD9Q9H257 536 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 LRRC4Q9HBW1 653 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 ITGB4P16144 1822 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 TBC1D12O60347 775 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 CYP2B6P20813 491 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 PTGER2P43116 358 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 AMHR2Q16671 573 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 IZUMO3Q5VZ72 239 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 NUGGCQ68CJ6 796 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 ACAD10Q6JQN1 1059 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 ERO1BQ86YB8 467 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 OR6J1Q8NGC5 347 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 PYROXD1Q8WU10 500 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 CLMNQ96JQ2 1002 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 C17orf75Q9HAS0 396 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 IP6K2Q9UHH9 426 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 GTF3C4Q9UKN8 822 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 INPP5FQ9Y2H2 1132 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 FAM187AA6NFU0 413 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 PHF2O75151 1096 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 STK10O94804 968 aaKnown RBP14.04□□□□□ -0.16
HMGN1-216ENST00000486741 HSD17B3P37058 310 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 EIF3BP55884 814 aaKnown RBP14.04□□□□□ -0.16
HMGN1-216ENST00000486741 SNAPC2Q13487 334 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 LONRF1Q17RB8 773 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 FAM133BQ5BKY9 247 aaKnown RBP14.04□□□□□ -0.16
HMGN1-216ENST00000486741 KCNT1Q5JUK3 1230 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 DAB2IPQ5VWQ8 1189 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 FBXO25Q8TCJ0 367 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 SPIRE2Q8WWL2 714 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 P3H4Q92791 437 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 RBM41Q96IZ5 413 aaKnown RBP14.04□□□□□ -0.16
HMGN1-216ENST00000486741 CAMKK2Q96RR4 588 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 ZSWIM1Q9BR11 485 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 OSBPL8Q9BZF1 889 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 ISCUQ9H1K1 167 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 COMMD10Q9Y6G5 202 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 MYO1CO00159 1063 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 FANCGO15287 622 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 PJA2O43164 708 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 ITGB3P05106 788 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 GJB1P08034 283 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 RAP1GAPP47736 663 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 KYNUQ16719 465 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 IER5Q5VY09 327 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 C1orf228Q6PIY5 440 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 OPTNQ96CV9 577 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 ACAP3Q96P50 834 aa14.04□□□□□ -0.16
HMGN1-216ENST00000486741 A8MXQ7 604 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 CA4P22748 312 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 PHBP35232 272 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 ARSEP51690 589 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 PPATQ06203 517 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 SGSM1Q2NKQ1 1148 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 C6orf118Q5T5N4 469 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 TMEM161BQ8NDZ6 487 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 ASCC2Q9H1I8 757 aaPredicted RBP14.03□□□□□ -0.16
HMGN1-216ENST00000486741 ADARB2Q9NS39 739 aaKnown RBP14.03□□□□□ -0.16
HMGN1-216ENST00000486741 MAP3K20Q9NYL2 800 aaKnown RBP14.03□□□□□ -0.16
HMGN1-216ENST00000486741 GPRC5DQ9NZD1 345 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 CLTAP09496 248 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 HNRNPH3P31942 346 aaKnown RBP14.03□□□□□ -0.16
HMGN1-216ENST00000486741 RFC5P40937 340 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 CDH6P55285 790 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 PPP2R2AP63151 447 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 DHX34Q14147 1143 aaKnown RBP14.03□□□□□ -0.16
HMGN1-216ENST00000486741 SLC29A2Q14542 456 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 SLC13A5Q86YT5 568 aaPredicted RBP14.03□□□□□ -0.16
HMGN1-216ENST00000486741 ANKMY2Q8IV38 441 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 HACE1Q8IYU2 909 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 TSEN2Q8NCE0 465 aaKnown RBP14.03□□□□□ -0.16
HMGN1-216ENST00000486741 ATP8B4Q8TF62 1192 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 CPB2Q96IY4 423 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 SMC6Q96SB8 1091 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 PRDM4Q9UKN5 801 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 INTUQ9ULD6 942 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 AKAP11Q9UKA4 1901 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 ALDH5A1P51649 535 aaPredicted RBP14.03□□□□□ -0.16
HMGN1-216ENST00000486741 ERVK-9P63128 1117 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 IRX4P78413 519 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 NT5DC3Q86UY8 548 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 PALB2Q86YC2 1186 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 NLGN2Q8NFZ4 835 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 MDM1Q8TC05 714 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 CFAP36Q96G28 342 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 ERAP1Q9NZ08 941 aa14.03□□□□□ -0.16
HMGN1-216ENST00000486741 ABT1Q9ULW3 272 aaKnown RBP14.03□□□□□ -0.16
HMGN1-216ENST00000486741 PIN4Q9Y237 131 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms