RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 PPFIBP1Q86W92 1011 aa19.78■□□□□ 0.76
COL1A1-207ENST00000486572 SCFD1Q8WVM8 642 aa19.78■□□□□ 0.76
COL1A1-207ENST00000486572 RIN2Q8WYP3 895 aaPredicted RBP19.78■□□□□ 0.76
COL1A1-207ENST00000486572 CASP10Q92851 521 aa19.78■□□□□ 0.76
COL1A1-207ENST00000486572 SAAL1Q96ER3 474 aa19.78■□□□□ 0.76
COL1A1-207ENST00000486572 CBWD1Q9BRT8 395 aa19.78■□□□□ 0.76
COL1A1-207ENST00000486572 FAM213AQ9BRX8 229 aa19.78■□□□□ 0.76
COL1A1-207ENST00000486572 TTPALQ9BTX7 342 aa19.78■□□□□ 0.76
COL1A1-207ENST00000486572 ASB7Q9H672 318 aa19.78■□□□□ 0.76
COL1A1-207ENST00000486572 KIAA0391O15091 583 aaKnown RBP19.77■□□□□ 0.76
COL1A1-207ENST00000486572 RPN1P04843 607 aaKnown RBP19.77■□□□□ 0.76
COL1A1-207ENST00000486572 ADH1AP07327 375 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 PRR29P0C7W0 189 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 IGFBP6P24592 240 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-207ENST00000486572 KLRC2P26717 231 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 PSMD2Q13200 908 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 BMT2Q1RMZ1 405 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 RTP2Q5QGT7 225 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 JADE1Q6IE81 842 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 KANK3Q6NY19 840 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 CD300LGQ6UXG3 332 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-207ENST00000486572 CEP57Q86XR8 500 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 FMR1NBQ8N0W7 255 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-207ENST00000486572 SMRP1Q8NCR6 262 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 ADAMTS19Q8TE59 1207 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 RXFP1Q9HBX9 757 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.77■□□□□ 0.76
COL1A1-207ENST00000486572 FAM50BQ9Y247 325 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 DERAQ9Y315 318 aa19.77■□□□□ 0.76
COL1A1-207ENST00000486572 SPTBN5Q9NRC6 3674 aaKnown RBP19.77■□□□□ 0.75
COL1A1-207ENST00000486572 GRXCR2A6NFK2 248 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 TEX28O15482 410 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 EXTL3O43909 919 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 IL18RAPO95256 599 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 NFICP08651 508 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 LRPAP1P30533 357 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 FAM160A1Q05DH4 1040 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 DPYDQ12882 1025 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 SMAD4Q13485 552 aaKnown RBP19.76■□□□□ 0.75
COL1A1-207ENST00000486572 TMEM132DQ14C87 1099 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 ANKRD54Q6NXT1 300 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 NELFCDQ8IXH7 590 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 BEST2Q8NFU1 509 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 SLC22A17Q8WUG5 538 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 PIK3R5Q8WYR1 880 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 CCDC47Q96A33 483 aaKnown RBP19.76■□□□□ 0.75
COL1A1-207ENST00000486572 PCIF1Q9H4Z3 704 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 C2CD2Q9Y426 696 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 NUB1Q9Y5A7 615 aa19.76■□□□□ 0.75
COL1A1-207ENST00000486572 A0A0C4DFX4 3053 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 TGFB1I1O43294 461 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 MBTPS2O43462 519 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 IL9P15248 144 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 EPCAMP16422 314 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 HOXB8P17481 243 aaPredicted RBP19.75■□□□□ 0.75
COL1A1-207ENST00000486572 FGFR3P22607 806 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 BRCC3P46736 316 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 CLCN4P51793 760 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 SNRPFP62306 86 aaKnown RBP19.75■□□□□ 0.75
COL1A1-207ENST00000486572 STK4Q13043 487 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 SPATA1Q5VX52 437 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 PDXDC1Q6P996 788 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 HS2ST1Q7LGA3 356 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 BRSK2Q8IWQ3 736 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 GPD1LQ8N335 351 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 KIAA0895Q8NCT3 520 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 ZSWIM2Q8NEG5 633 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 ENGASEQ8NFI3 743 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 COL25A1Q9BXS0 654 aaPredicted RBP19.75■□□□□ 0.75
COL1A1-207ENST00000486572 AGPAT3Q9NRZ7 376 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 DZANK1Q9NVP4 752 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 RBAKQ9NYW8 714 aaPredicted RBP19.75■□□□□ 0.75
COL1A1-207ENST00000486572 FNIP2Q9P278 1114 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 ANK1P16157 1881 aa19.75■□□□□ 0.75
COL1A1-207ENST00000486572 GOLGA8IPA6NC78 632 aa19.74■□□□□ 0.75
COL1A1-207ENST00000486572 GOLGA8JA6NMD2 632 aa19.74■□□□□ 0.75
COL1A1-207ENST00000486572 I3L4J1 428 aa19.74■□□□□ 0.75
COL1A1-207ENST00000486572 MCM4P33991 863 aa19.74■□□□□ 0.75
COL1A1-207ENST00000486572 SNW1Q13573 536 aaKnown RBP19.74■□□□□ 0.75
COL1A1-207ENST00000486572 PSMD5Q16401 504 aa19.74■□□□□ 0.75
COL1A1-207ENST00000486572 KNOP1Q1ED39 458 aaKnown RBP19.74■□□□□ 0.75
COL1A1-207ENST00000486572 PRSS55Q6UWB4 352 aaPredicted RBP19.74■□□□□ 0.75
COL1A1-207ENST00000486572 NOC3LQ8WTT2 800 aaKnown RBP19.74■□□□□ 0.75
COL1A1-207ENST00000486572 HSPBP1Q9NZL4 362 aa19.74■□□□□ 0.75
COL1A1-207ENST00000486572 CGNQ9P2M7 1197 aaKnown RBP19.74■□□□□ 0.75
COL1A1-207ENST00000486572 VWA8A3KMH1 1905 aa19.73■□□□□ 0.75
COL1A1-207ENST00000486572 RHOBTB3O94955 611 aa19.73■□□□□ 0.75
COL1A1-207ENST00000486572 GLUD1P00367 558 aa19.73■□□□□ 0.75
COL1A1-207ENST00000486572 RPL17P18621 184 aaKnown RBP19.73■□□□□ 0.75
COL1A1-207ENST00000486572 TKTP29401 623 aaKnown RBP19.73■□□□□ 0.75
COL1A1-207ENST00000486572 GUCY2FP51841 1108 aa19.73■□□□□ 0.75
COL1A1-207ENST00000486572 SMAD2Q15796 467 aaKnown RBP19.73■□□□□ 0.75
COL1A1-207ENST00000486572 SYCE2Q6PIF2 218 aa19.73■□□□□ 0.75
COL1A1-207ENST00000486572 NT5DC4Q86YG4 428 aa19.73■□□□□ 0.75
COL1A1-207ENST00000486572 TMEM130Q8N3G9 435 aa19.73■□□□□ 0.75
COL1A1-207ENST00000486572 LNX1Q8TBB1 728 aaPredicted RBP19.73■□□□□ 0.75
COL1A1-207ENST00000486572 FBXL18Q96ME1 805 aa19.73■□□□□ 0.75
COL1A1-207ENST00000486572 UHRF1Q96T88 793 aaPredicted RBP19.73■□□□□ 0.75
COL1A1-207ENST00000486572 SYN3O14994 580 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms