RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 CXCL16Q9H2A7 254 aa10.89□□□□□ -0.67
SND1-213ENST00000486037 NXF3Q9H4D5 531 aaKnown RBP10.89□□□□□ -0.67
SND1-213ENST00000486037 GJB4Q9NTQ9 266 aa10.89□□□□□ -0.67
SND1-213ENST00000486037 KLK14Q9P0G3 267 aa10.89□□□□□ -0.67
SND1-213ENST00000486037 CACNA1EQ15878 2313 aa10.89□□□□□ -0.67
SND1-213ENST00000486037 MSH4O15457 936 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 TADA2AO75478 443 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 RPP40O75818 363 aaKnown RBP10.88□□□□□ -0.67
SND1-213ENST00000486037 F13A1P00488 732 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 SRGAP2CP0DJJ0 459 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 CDC42EP1Q00587 391 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 SETQ01105 290 aaPredicted RBP10.88□□□□□ -0.67
SND1-213ENST00000486037 GUCY1B3Q02153 619 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 CREMQ03060 361 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 COL28A1Q2UY09 1125 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 FAM171A1Q5VUB5 890 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 PPP1R18Q6NYC8 613 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 NAV2Q8IVL1 2488 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 TTC8Q8TAM2 541 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 IRF7Q92985 503 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 KIF12Q96FN5 646 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 TTPALQ9BTX7 342 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 RNF26Q9BY78 433 aaPredicted RBP10.88□□□□□ -0.67
SND1-213ENST00000486037 ZFP14Q9HCL3 533 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 TRPV5Q9NQA5 729 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 VPS45Q9NRW7 570 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 BMP2KQ9NSY1 1161 aaPredicted RBP10.88□□□□□ -0.67
SND1-213ENST00000486037 COL4A3BPQ9Y5P4 624 aa10.88□□□□□ -0.67
SND1-213ENST00000486037 SF3B1O75533 1304 aaKnown RBP eCLIP10.87□□□□□ -0.674e-6■■■■■ 53
SND1-213ENST00000486037 ASCC3Q8N3C0 2202 aaKnown RBP10.87□□□□□ -0.67
SND1-213ENST00000486037 LNP1A1A4G5 178 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 WDR27A2RRH5 827 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 CASTOR2A6NHX0 329 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 SLC38A8A6NNN8 435 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 PRPF3O43395 683 aaKnown RBP10.87□□□□□ -0.67
SND1-213ENST00000486037 TSPAN1O60635 241 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 MOSPD3O75425 235 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 PSMC3P17980 439 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 HOXA6P31267 233 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 OR1D2P34982 312 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 DNM2P50570 870 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 NPEPPSP55786 919 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 RAB33AQ14088 237 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 HSP90AA2PQ14568 343 aaPredicted RBP10.87□□□□□ -0.67
SND1-213ENST00000486037 XKR3Q5GH77 459 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 ANO5Q75V66 913 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 CDR2LQ86X02 465 aaPredicted RBP10.87□□□□□ -0.67
SND1-213ENST00000486037 PROSER1Q86XN7 944 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 TRIM22Q8IYM9 498 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 DEFB124Q8NES8 71 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 PRPF31Q8WWY3 499 aaKnown RBP10.87□□□□□ -0.67
SND1-213ENST00000486037 TMEM143Q96AN5 459 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 UBN1Q9NPG3 1134 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 AVENQ9NQS1 362 aaPredicted RBP10.87□□□□□ -0.67
SND1-213ENST00000486037 BARHL2Q9NY43 387 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 KIF3AQ9Y496 699 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 NEUROG3Q9Y4Z2 214 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 PCDHGA5Q9Y5G8 931 aa10.87□□□□□ -0.67
SND1-213ENST00000486037 DDX11L8A8MPP1 907 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 H3BQV1 296 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 CDX4O14627 284 aaPredicted RBP10.86□□□□□ -0.67
SND1-213ENST00000486037 DCLK1O15075 740 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 NR1I2O75469 434 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 DEXIO95424 95 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 BAG4O95429 457 aaKnown RBP10.86□□□□□ -0.67
SND1-213ENST00000486037 CCDC192P0DO97 292 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 CEACAM1P13688 526 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 GJA1P17302 382 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 RESTQ13127 1097 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 LRRC32Q14392 662 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 NFKBIBQ15653 356 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 UVSSAQ2YD98 709 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 PLK5Q496M5 336 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 CLEC17AQ6ZS10 378 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 SRGAP1Q7Z6B7 1085 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 FERMT3Q86UX7 667 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 GPIHBP1Q8IV16 184 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 HS6ST3Q8IZP7 471 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 FBXO18Q8NFZ0 1043 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 C8orf76Q96K31 380 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 CORO1BQ9BR76 489 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 DUSP15Q9H1R2 295 aaPredicted RBP10.86□□□□□ -0.67
SND1-213ENST00000486037 SNTG2Q9NY99 539 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 SSUH2Q9Y2M2 353 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 GIT1Q9Y2X7 761 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 MSRB2Q9Y3D2 182 aa10.86□□□□□ -0.67
SND1-213ENST00000486037 V9GY48 417 aaPredicted RBP10.86□□□□□ -0.67
SND1-213ENST00000486037 KALRNO60229 2985 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 ATG2BQ96BY7 2078 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 PATE3B3GLJ2 98 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 ZNF263O14978 683 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 PDIA4P13667 645 aaKnown RBP10.85□□□□□ -0.67
SND1-213ENST00000486037 CIITAP33076 1130 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 LAMTOR4Q0VGL1 99 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 GRIK3Q13003 919 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 CCINQ13939 588 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 PON2Q15165 354 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 AMHR2Q16671 573 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 CNNM3Q8NE01 707 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 SLC5A5Q92911 643 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms