RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 HERC2P3Q9BVR0 1158 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 GTPBP4Q9BZE4 634 aaKnown RBP12.84□□□□□ -0.35
HPS4-214ENST00000485842 GPR62Q9BZJ7 368 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 KIAA1586Q9HCI6 787 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 KIAA1468Q9P260 1216 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 DERAQ9Y315 318 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 C2CD2Q9Y426 696 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 NUB1Q9Y5A7 615 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 HIDE1A8MVS5 230 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 I3L4J1 428 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 PPEF2O14830 753 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 MBD3O95983 291 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 URODP06132 367 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 TMEM191BP0C7N4 346 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 CYP3A5P20815 502 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 NR2F2P24468 414 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 RPL9P32969 192 aaKnown RBP12.83□□□□□ -0.36
HPS4-214ENST00000485842 MCM4P33991 863 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 NRIP1P48552 1158 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 GLUD2P49448 558 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 MORC3Q14149 939 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 BMS1Q14692 1282 aaKnown RBP12.83□□□□□ -0.36
HPS4-214ENST00000485842 ZBTB6Q15916 424 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 SPATA1Q5VX52 437 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 CEP135Q66GS9 1140 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 KLHL10Q6JEL2 608 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 PDE12Q6L8Q7 609 aaKnown RBP12.83□□□□□ -0.36
HPS4-214ENST00000485842 KIAA1841Q6NSI8 718 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 TAS1R1Q7RTX1 841 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 RBM23Q86U06 439 aaKnown RBP12.83□□□□□ -0.36
HPS4-214ENST00000485842 FBXL18Q96ME1 805 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 TSPAN18Q96SJ8 248 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 TSG101Q99816 390 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 IGFLR1Q9H665 355 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 NGRNQ9NPE2 291 aaKnown RBP12.83□□□□□ -0.36
HPS4-214ENST00000485842 TRAF3IP3Q9Y228 551 aa12.83□□□□□ -0.36
HPS4-214ENST00000485842 TRIM49BA6NDI0 452 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 TMEM189-UBE2V1I3L0A0 370 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 PSMA7O14818 248 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 PER2O15055 1255 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 CXCL14O95715 111 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 DLATP10515 647 aaKnown RBP12.82□□□□□ -0.36
HPS4-214ENST00000485842 CTSAP10619 480 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 CD44P16070 742 aaKnown RBP12.82□□□□□ -0.36
HPS4-214ENST00000485842 BMP6P22004 513 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 LRPAP1P30533 357 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 GTF2F1P35269 517 aaKnown RBP eCLIP12.82□□□□□ -0.36
HPS4-214ENST00000485842 CASP4P49662 377 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 CYP24A1Q07973 514 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 HYAL1Q12794 435 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 ELAVL2Q12926 359 aaKnown RBP12.82□□□□□ -0.36
HPS4-214ENST00000485842 SURF1Q15526 300 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 PTPN14Q15678 1187 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 USP41Q3LFD5 358 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 ZCWPW2Q504Y3 356 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 COBLL1Q53SF7 1204 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 FAM171A1Q5VUB5 890 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 EP400NLQ6ZTU2 488 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 CEP57Q86XR8 500 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 NT5DC4Q86YG4 428 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 SLC9A9Q8IVB4 645 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 RNF168Q8IYW5 571 aaPredicted RBP12.82□□□□□ -0.36
HPS4-214ENST00000485842 ADSSL1Q8N142 457 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 CCDC127Q96BQ5 260 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 ANKRD36BP1Q96IX9 119 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 FNBP1Q96RU3 617 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 MTMR12Q9C0I1 747 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 TLE6Q9H808 572 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 DMAC2Q9NW81 257 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 DPP3Q9NY33 737 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 STK39Q9UEW8 545 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 CTNND2Q9UQB3 1225 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 FRMD4BQ9Y2L6 1034 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.82□□□□□ -0.36
HPS4-214ENST00000485842 PTPRJQ12913 1337 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 VWA8A3KMH1 1905 aa12.82□□□□□ -0.36
HPS4-214ENST00000485842 CDH23Q9H251 3354 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 C2orf71A6NGG8 1288 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 TRAPPC3O43617 180 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 TNNC2P02585 160 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 TNNI1P19237 187 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 CCNE1P24864 410 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 RPL13P26373 211 aaKnown RBP12.81□□□□□ -0.36
HPS4-214ENST00000485842 TKTP29401 623 aaKnown RBP12.81□□□□□ -0.36
HPS4-214ENST00000485842 PMS1P54277 932 aaKnown RBP12.81□□□□□ -0.36
HPS4-214ENST00000485842 PSMD6Q15008 389 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 EDRF1Q3B7T1 1238 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 C9orf57Q5W0N0 161 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 PRSS55Q6UWB4 352 aaPredicted RBP12.81□□□□□ -0.36
HPS4-214ENST00000485842 CD300LGQ6UXG3 332 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 MRPL43Q8N983 215 aaKnown RBP12.81□□□□□ -0.36
HPS4-214ENST00000485842 TRIML1Q8N9V2 468 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 OR5B17Q8NGF7 314 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 CACTINQ8WUQ7 758 aaKnown RBP12.81□□□□□ -0.36
HPS4-214ENST00000485842 NELFBQ8WX92 580 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 RIN2Q8WYP3 895 aaPredicted RBP12.81□□□□□ -0.36
HPS4-214ENST00000485842 EEF2KMTQ96G04 330 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 CGRRF1Q99675 332 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 PRDM6Q9NQX0 595 aa12.81□□□□□ -0.36
HPS4-214ENST00000485842 MRPL17Q9NRX2 175 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms