RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 SCN1AP35498 2009 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 DDHD2O94830 711 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 TNNI1P19237 187 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 KCNJ6P48051 423 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 KCNMA1Q12791 1236 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 DCAF17Q5H9S7 520 aaPredicted RBP17.11■□□□□ 0.33
APOE-205ENST00000485628 CD300LGQ6UXG3 332 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 TMCO2Q7Z6W1 182 aaPredicted RBP17.11■□□□□ 0.33
APOE-205ENST00000485628 ZNF280BQ86YH2 543 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 SEMA4DQ92854 862 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 FAM212AQ96EL1 285 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 XYLT2Q9H1B5 865 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 VPS16Q9H269 839 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 VRTNQ9H8Y1 702 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 SLC38A7Q9NVC3 462 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 DPP3Q9NY33 737 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 TUBGCP4Q9UGJ1 667 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 ITGA11Q9UKX5 1188 aa17.11■□□□□ 0.33
APOE-205ENST00000485628 LAMA2P24043 3122 aaKnown RBP17.11■□□□□ 0.33
APOE-205ENST00000485628 TEX33O43247 280 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 N4BP1O75113 896 aaKnown RBP17.1■□□□□ 0.33
APOE-205ENST00000485628 LRRN2O75325 713 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 STAU1O95793 577 aaKnown RBP17.1■□□□□ 0.33
APOE-205ENST00000485628 EFEMP2O95967 443 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 POMCP01189 267 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 TFAMQ00059 246 aaKnown RBP17.1■□□□□ 0.33
APOE-205ENST00000485628 TUSC3Q13454 348 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 GSE1Q14687 1217 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 UPP1Q16831 310 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 TCERG1LQ5VWI1 586 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 HERC6Q8IVU3 1022 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 CMTR2Q8IYT2 770 aaKnown RBP17.1■□□□□ 0.33
APOE-205ENST00000485628 ANKRD20A12PQ8NF67 263 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 ANKRD36BP1Q96IX9 119 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 MTIF3Q9H2K0 278 aaKnown RBP17.1■□□□□ 0.33
APOE-205ENST00000485628 NRDE2Q9H7Z3 1164 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 SIK3Q9Y2K2 1263 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 SLC4A7Q9Y6M7 1214 aa17.1■□□□□ 0.33
APOE-205ENST00000485628 A0A1W2PQC6 194 aa17.09■□□□□ 0.33
APOE-205ENST00000485628 XPOTO43592 962 aaKnown RBP17.09■□□□□ 0.33
APOE-205ENST00000485628 UPP2O95045 317 aa17.09■□□□□ 0.33
APOE-205ENST00000485628 IGFBP6P24592 240 aaPredicted RBP17.09■□□□□ 0.33
APOE-205ENST00000485628 RPL9P32969 192 aaKnown RBP17.09■□□□□ 0.33
APOE-205ENST00000485628 AARSP49588 968 aaKnown RBP eCLIP17.09■□□□□ 0.33
APOE-205ENST00000485628 MXI1P50539 228 aa17.09■□□□□ 0.33
APOE-205ENST00000485628 GUCY2FP51841 1108 aa17.09■□□□□ 0.33
APOE-205ENST00000485628 UBASH3AP57075 661 aa17.09■□□□□ 0.33
APOE-205ENST00000485628 C9orf57Q5W0N0 161 aa17.09■□□□□ 0.33
APOE-205ENST00000485628 LIMS2Q7Z4I7 341 aa17.09■□□□□ 0.33
APOE-205ENST00000485628 FBXL13Q8NEE6 735 aa17.09■□□□□ 0.33
APOE-205ENST00000485628 BEST2Q8NFU1 509 aa17.09■□□□□ 0.33
APOE-205ENST00000485628 TAS1R2Q8TE23 839 aa17.09■□□□□ 0.33
APOE-205ENST00000485628 RPS6KC1Q96S38 1066 aa17.09■□□□□ 0.33
APOE-205ENST00000485628 MRPL9Q9BYD2 267 aaKnown RBP17.09■□□□□ 0.33
APOE-205ENST00000485628 XPO4Q9C0E2 1151 aaKnown RBP17.09■□□□□ 0.33
APOE-205ENST00000485628 TBKBP1A7MCY6 615 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 ZBBXA8MT70 800 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 TMEM189-UBE2V1I3L0A0 370 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 PPEF2O14830 753 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 SERPINC1P01008 464 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 HLA-DRAP01903 254 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 TNNC2P02585 160 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 TMEM191BP0C7N4 346 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 ATP2A2P16615 1042 aaKnown RBP17.08■□□□□ 0.32
APOE-205ENST00000485628 CREBRFQ8IUR6 639 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 LRRC52Q8N7C0 313 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 EHBP1Q8NDI1 1231 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 URGCPQ8TCY9 931 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 CLP1Q92989 425 aaKnown RBP17.08■□□□□ 0.32
APOE-205ENST00000485628 DDX27Q96GQ7 796 aaKnown RBP17.08■□□□□ 0.32
APOE-205ENST00000485628 FAXDC2Q96IV6 333 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 UROC1Q96N76 676 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 RAD9AQ99638 391 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 PAAF1Q9BRP4 392 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 TMEM175Q9BSA9 504 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 GRPEL1Q9HAV7 217 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 GOLGA2P5Q9HBQ8 144 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 SIX2Q9NPC8 291 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 RAB20Q9NX57 234 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 IFNKQ9P0W0 207 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 INPP5FQ9Y2H2 1132 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 INSL6Q9Y581 213 aa17.08■□□□□ 0.32
APOE-205ENST00000485628 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
APOE-205ENST00000485628 NOL4O94818 638 aa17.07■□□□□ 0.32
APOE-205ENST00000485628 ASS1P00966 412 aaKnown RBP17.07■□□□□ 0.32
APOE-205ENST00000485628 ITGB3P05106 788 aa17.07■□□□□ 0.32
APOE-205ENST00000485628 PON1P27169 355 aa17.07■□□□□ 0.32
APOE-205ENST00000485628 RBP5P82980 135 aa17.07■□□□□ 0.32
APOE-205ENST00000485628 MYL7Q01449 175 aa17.07■□□□□ 0.32
APOE-205ENST00000485628 ABI1Q8IZP0 508 aa17.07■□□□□ 0.32
APOE-205ENST00000485628 LRRC43Q8N309 656 aa17.07■□□□□ 0.32
APOE-205ENST00000485628 C3orf58Q8NDZ4 430 aa17.07■□□□□ 0.32
APOE-205ENST00000485628 UBE2OQ9C0C9 1292 aaKnown RBP17.07■□□□□ 0.32
APOE-205ENST00000485628 HCSTQ9UBK5 93 aa17.07■□□□□ 0.32
APOE-205ENST00000485628 DNAJB4Q9UDY4 337 aa17.07■□□□□ 0.32
APOE-205ENST00000485628 GBF1Q92538 1859 aa17.07■□□□□ 0.32
APOE-205ENST00000485628 KIAA1671Q9BY89 1806 aa17.07■□□□□ 0.32
APOE-205ENST00000485628 ZC3H11AO75152 810 aaKnown RBP eCLIP17.06■□□□□ 0.32
APOE-205ENST00000485628 GALTP07902 379 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 SLC9A1P19634 815 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms