RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 SEMA4DQ92854 862 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 TSGA10Q9BZW7 698 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 RNF208Q9H0X6 261 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 UNC93B1Q9H1C4 597 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 ASB7Q9H672 318 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 HAUS4Q9H6D7 363 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 STARD7Q9NQZ5 370 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 MROH7Q68CQ1 1323 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 A0A0U1RQG5 324 aaPredicted RBP10.26□□□□□ -0.77
CTSA-208ENST00000485627 LACTBL1A8MY62 500 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 KRT86O43790 486 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 KIF5CO60282 957 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 EVI5O60447 810 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 LRRN2O75325 713 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 RPS6KA5O75582 802 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 PLEKP08567 350 aaPredicted RBP10.26□□□□□ -0.77
CTSA-208ENST00000485627 CTSHP09668 335 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 TBXAS1P24557 533 aaPredicted RBP10.26□□□□□ -0.77
CTSA-208ENST00000485627 THPOP40225 353 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 PRKCIP41743 596 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 WNT7BP56706 349 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 GCNT1Q02742 428 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 TMEM132DQ14C87 1099 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 SGSM1Q2NKQ1 1148 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 HGSNATQ68CP4 663 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 LHX8Q68G74 356 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 C15orf39Q6ZRI6 1047 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 TRAPPC11Q7Z392 1133 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 IRF2BP2Q7Z5L9 587 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 RPAINQ86UA6 219 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 NT5DC4Q86YG4 428 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 REXO1L1PQ8IX06 675 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 HACE1Q8IYU2 909 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 DEFB123Q8N688 67 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 OR5B17Q8NGF7 314 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 ZNF592Q92610 1267 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 PI4K2AQ9BTU6 479 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 HTATIP2Q9BUP3 242 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 SEZ6LQ9BYH1 1024 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 IFIH1Q9BYX4 1025 aaKnown RBP10.26□□□□□ -0.77
CTSA-208ENST00000485627 MTMR12Q9C0I1 747 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 PLEKHA5Q9HAU0 1116 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 LZTFL1Q9NQ48 299 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 AJAP1Q9UKB5 411 aaPredicted RBP10.26□□□□□ -0.77
CTSA-208ENST00000485627 NR2E3Q9Y5X4 410 aa10.26□□□□□ -0.77
CTSA-208ENST00000485627 UNC80Q8N2C7 3258 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 A0A1W2PQ45 241 aaPredicted RBP10.25□□□□□ -0.77
CTSA-208ENST00000485627 A0A1W2PQY0 241 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 FOXN3O00409 490 aaPredicted RBP10.25□□□□□ -0.77
CTSA-208ENST00000485627 GPR182O15218 404 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 KRT19P08727 400 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 KRT5P13647 590 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 ZSCAN20P17040 1043 aaPredicted RBP10.25□□□□□ -0.77
CTSA-208ENST00000485627 TNFAIP3P21580 790 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 HOXA11P31270 313 aaPredicted RBP10.25□□□□□ -0.77
CTSA-208ENST00000485627 MAGEA1P43355 309 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 VAV2P52735 878 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 YWHAEP62258 255 aaKnown RBP10.25□□□□□ -0.77
CTSA-208ENST00000485627 NOP14P78316 857 aaKnown RBP10.25□□□□□ -0.77
CTSA-208ENST00000485627 KIF5AQ12840 1032 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 NFX1Q12986 1120 aaKnown RBP10.25□□□□□ -0.77
CTSA-208ENST00000485627 SLC18A3Q16572 532 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 CCDC122Q5T0U0 273 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 C10orf76Q5T2E6 689 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 TWF2Q6IBS0 349 aaKnown RBP10.25□□□□□ -0.77
CTSA-208ENST00000485627 NYAP1Q6ZVC0 841 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 TMEM192Q8IY95 271 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 KIF18AQ8NI77 898 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 HELQQ8TDG4 1101 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 U2AF1L4Q8WU68 220 aaKnown RBP10.25□□□□□ -0.77
CTSA-208ENST00000485627 TATDN2Q93075 761 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 JAKMIP2Q96AA8 810 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 SEPT11Q9NVA2 429 aaKnown RBP10.25□□□□□ -0.77
CTSA-208ENST00000485627 SNTG2Q9NY99 539 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 PARP2Q9UGN5 583 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 ZMYND8Q9ULU4 1186 aaPredicted RBP10.25□□□□□ -0.77
CTSA-208ENST00000485627 NOC2LQ9Y3T9 749 aaKnown RBP10.25□□□□□ -0.77
CTSA-208ENST00000485627 PCDHA13Q9Y5I0 950 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 GRIN2DO15399 1336 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 PTPRJQ12913 1337 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 SCN10AQ9Y5Y9 1956 aa10.25□□□□□ -0.77
CTSA-208ENST00000485627 XPOTO43592 962 aaKnown RBP10.24□□□□□ -0.77
CTSA-208ENST00000485627 CAND2O75155 1236 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 VNN1O95497 513 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 NFICP08651 508 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 PNMA6AP0CW24 399 aaPredicted RBP10.24□□□□□ -0.77
CTSA-208ENST00000485627 P4HA1P13674 534 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 PDE6CP51160 858 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 BPIFB4P59827 614 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 GNG11P61952 73 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 CYP27A1Q02318 531 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 PTK2Q05397 1052 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 GFPT1Q06210 699 aaPredicted RBP10.24□□□□□ -0.77
CTSA-208ENST00000485627 BMS1Q14692 1282 aaKnown RBP10.24□□□□□ -0.77
CTSA-208ENST00000485627 ASTE1Q2TB18 679 aaPredicted RBP10.24□□□□□ -0.77
CTSA-208ENST00000485627 ZNF699Q32M78 642 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 SLC10A6Q3KNW5 377 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 JADE1Q6IE81 842 aa10.24□□□□□ -0.77
CTSA-208ENST00000485627 ZNF571Q7Z3V5 609 aaPredicted RBP10.24□□□□□ -0.77
CTSA-208ENST00000485627 FAM228AQ86W67 206 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms