RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 A0A087WWV3 80 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 C4orf47A7E2U8 309 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 NRG2O14511 850 aaPredicted RBP13.48□□□□□ -0.25
SSR4-210ENST00000485612 ZNF263O14978 683 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 TBX3O15119 743 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 TSPAN1O60635 241 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 DKC1O60832 514 aaKnown RBP eCLIP13.48□□□□□ -0.25
SSR4-210ENST00000485612 RPP40O75818 363 aaKnown RBP13.48□□□□□ -0.25
SSR4-210ENST00000485612 FDPSP14324 419 aaKnown RBP13.48□□□□□ -0.25
SSR4-210ENST00000485612 AKAP5P24588 427 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 AXLP30530 894 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 OR1D2P34982 312 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 MPLP40238 635 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 FOSBP53539 338 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 GRIK3Q13003 919 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 SOWAHCQ53LP3 525 aaPredicted RBP13.48□□□□□ -0.25
SSR4-210ENST00000485612 SH3PXD2AQ5TCZ1 1133 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 NOTUMQ6P988 496 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 VITQ6UXI7 678 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 Q6ZS52 159 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 CDR2LQ86X02 465 aaPredicted RBP13.48□□□□□ -0.25
SSR4-210ENST00000485612 NECAB1Q8N987 351 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 ASAP3Q8TDY4 903 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 TNFRSF25Q93038 417 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 CCDC51Q96ER9 411 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 MTRQ99707 1265 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 PAAF1Q9BRP4 392 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 TRIM6Q9C030 488 aaPredicted RBP13.48□□□□□ -0.25
SSR4-210ENST00000485612 CSRNP2Q9H175 543 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 ORC3Q9UBD5 711 aaPredicted RBP13.48□□□□□ -0.25
SSR4-210ENST00000485612 PCDHGA5Q9Y5G8 931 aa13.48□□□□□ -0.25
SSR4-210ENST00000485612 ANK1P16157 1881 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 MARCH6O60337 910 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 CDKL5O76039 1030 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 SLITRK3O94933 977 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 MLLT6P55198 1093 aaPredicted RBP13.47□□□□□ -0.25
SSR4-210ENST00000485612 PTENP60484 403 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 NCBP1Q09161 790 aaKnown RBP13.47□□□□□ -0.25
SSR4-210ENST00000485612 CAPSQ13938 189 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 AMHR2Q16671 573 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 PRSS36Q5K4E3 855 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 DGKKQ5KSL6 1271 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 DAB2IPQ5VWQ8 1189 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 TCEAL6Q6IPX3 200 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 C1orf228Q6PIY5 440 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 TPH2Q8IWU9 490 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 TCP11Q8WWU5 503 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 TCEAL3Q969E4 200 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 MSANTD3Q96H12 275 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 ASB16Q96NS5 453 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 EIF2AK1Q9BQI3 630 aaKnown RBP13.47□□□□□ -0.25
SSR4-210ENST00000485612 EDEM2Q9BV94 578 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 NXF3Q9H4D5 531 aaKnown RBP13.47□□□□□ -0.25
SSR4-210ENST00000485612 ZSWIM4Q9H7M6 989 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 KLK14Q9P0G3 267 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 PPME1Q9Y570 386 aa13.47□□□□□ -0.25
SSR4-210ENST00000485612 B4GALT5O43286 388 aa13.46□□□□□ -0.25
SSR4-210ENST00000485612 CCDC192P0DO97 292 aa13.46□□□□□ -0.25
SSR4-210ENST00000485612 CEACAM1P13688 526 aa13.46□□□□□ -0.25
SSR4-210ENST00000485612 KRT2P35908 639 aa13.46□□□□□ -0.25
SSR4-210ENST00000485612 MBTD1Q05BQ5 628 aa13.46□□□□□ -0.25
SSR4-210ENST00000485612 ELAVL2Q12926 359 aaKnown RBP13.46□□□□□ -0.25
SSR4-210ENST00000485612 PCBP1Q15365 356 aaKnown RBP eCLIP13.46□□□□□ -0.258e-6■■□□□ 12.1
SSR4-210ENST00000485612 OTUD6AQ7L8S5 288 aa13.46□□□□□ -0.25
SSR4-210ENST00000485612 CSGALNACT1Q8TDX6 532 aa13.46□□□□□ -0.25
SSR4-210ENST00000485612 DEPDC1BQ8WUY9 529 aa13.46□□□□□ -0.25
SSR4-210ENST00000485612 SMARCD2Q92925 531 aa13.46□□□□□ -0.25
SSR4-210ENST00000485612 TCEAL4Q96EI5 215 aa13.46□□□□□ -0.25
SSR4-210ENST00000485612 ZSWIM3Q96MP5 696 aa13.46□□□□□ -0.25
SSR4-210ENST00000485612 CORO1BQ9BR76 489 aa13.46□□□□□ -0.25
SSR4-210ENST00000485612 PARP2Q9UGN5 583 aa13.46□□□□□ -0.25
SSR4-210ENST00000485612 WDR27A2RRH5 827 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 CASTOR2A6NHX0 329 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 INO80B-WBP1J3KQ70 363 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 ZNF197O14709 1029 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 ASAP2O43150 1006 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 MICAL2O94851 1124 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 KIF4AO95239 1232 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 LRG1P02750 347 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 XBP1P17861 261 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 ARF4P18085 180 aaPredicted RBP13.45□□□□□ -0.26
SSR4-210ENST00000485612 GLRA2P23416 452 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 VIPR2P41587 438 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 PXNP49023 591 aaPredicted RBP13.45□□□□□ -0.26
SSR4-210ENST00000485612 KPNA1P52294 538 aaPredicted RBP13.45□□□□□ -0.26
SSR4-210ENST00000485612 TUSC3Q13454 348 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 WDR44Q5JSH3 913 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
SSR4-210ENST00000485612 EXOC8Q8IYI6 725 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 SLFN12Q8IYM2 578 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 PIGOQ8TEQ8 1089 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 NAP1L4Q99733 375 aaKnown RBP13.45□□□□□ -0.26
SSR4-210ENST00000485612 C8orf33Q9H7E9 229 aaPredicted RBP13.45□□□□□ -0.26
SSR4-210ENST00000485612 CDY1Q9Y6F8 540 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 F5P12259 2224 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 NBEAQ8NFP9 2946 aa13.45□□□□□ -0.26
SSR4-210ENST00000485612 ARNTLO00327 626 aa13.44□□□□□ -0.26
SSR4-210ENST00000485612 JAK2O60674 1132 aa13.44□□□□□ -0.26
SSR4-210ENST00000485612 BAG4O95429 457 aaKnown RBP13.44□□□□□ -0.26
SSR4-210ENST00000485612 NPTXRO95502 500 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms