RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 FOXP1Q9H334 677 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-227ENST00000485102 TMEM134Q9H6X4 195 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 UPF2Q9HAU5 1272 aaKnown RBP14.3□□□□□ -0.12
HDAC6-227ENST00000485102 TOPORSQ9NS56 1045 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-227ENST00000485102 SLC38A7Q9NVC3 462 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 MAFFQ9ULX9 164 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 PHLPP2Q6ZVD8 1323 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 MED19A0JLT2 244 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-227ENST00000485102 ZNF197O14709 1029 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 KCNE1P15382 129 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 RPL9P32969 192 aaKnown RBP14.29□□□□□ -0.12
HDAC6-227ENST00000485102 TRAPPC10P48553 1259 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 ROR1Q01973 937 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 ADCY1Q08828 1119 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 GLRA4Q5JXX5 417 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 PRSS36Q5K4E3 855 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 TPGS2Q68CL5 300 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 ZNF687Q8N1G0 1237 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 C4orf32Q8N8J7 132 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 ACO2Q99798 780 aaKnown RBP14.29□□□□□ -0.12
HDAC6-227ENST00000485102 HINFPQ9BQA5 517 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 CCDC94Q9BW85 323 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-227ENST00000485102 PLA2G2FQ9BZM2 168 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 BHMT2Q9H2M3 363 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 PRMT8Q9NR22 394 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-227ENST00000485102 STK24Q9Y6E0 443 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 CITO14578 2027 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 ACACBO00763 2458 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 EPG5Q9HCE0 2579 aa14.29□□□□□ -0.12
HDAC6-227ENST00000485102 WDR27A2RRH5 827 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 H7C4K7 107 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 MAN2B1O00754 1011 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 LRG1P02750 347 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 CD72P21854 359 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 PROZP22891 400 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 ELF1P32519 619 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 BRCC3P46736 316 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 YARSP54577 528 aaKnown RBP14.28□□□□□ -0.12
HDAC6-227ENST00000485102 CSTF1Q05048 431 aaKnown RBP14.28□□□□□ -0.12
HDAC6-227ENST00000485102 SOX4Q06945 474 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-227ENST00000485102 ST3GAL1Q11201 340 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 ZNF174Q15697 407 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 ECM1Q16610 540 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 TANGO2Q6ICL3 276 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 TPRG1Q6ZUI0 275 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 MCRS1Q96EZ8 462 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 NTPCRQ9BSD7 190 aaKnown RBP14.28□□□□□ -0.12
HDAC6-227ENST00000485102 KIFC3Q9BVG8 833 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 CDT1Q9H211 546 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 C17orf75Q9HAS0 396 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 GOLGA2P5Q9HBQ8 144 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 ARHGAP28Q9P2N2 729 aa14.28□□□□□ -0.12
HDAC6-227ENST00000485102 RBM19Q9Y4C8 960 aaKnown RBP14.28□□□□□ -0.12
HDAC6-227ENST00000485102 COL4A3Q01955 1670 aa14.27□□□□□ -0.12
HDAC6-227ENST00000485102 ABLIM1O14639 778 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 MCF2P10911 925 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 LIG1P18858 919 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 FCARP24071 287 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 NPTX2P47972 431 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 NEK4P51957 841 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 EPHA5P54756 1037 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 MLLT6P55198 1093 aaPredicted RBP14.27□□□□□ -0.13
HDAC6-227ENST00000485102 MAP4K3Q8IVH8 894 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 CEP120Q8N960 986 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 IGSF22Q8N9C0 903 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 LEMD2Q8NC56 503 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 FBXO18Q8NFZ0 1043 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 ING5Q8WYH8 240 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 SECISBP2LQ93073 1101 aaKnown RBP14.27□□□□□ -0.13
HDAC6-227ENST00000485102 ZMAT2Q96NC0 199 aaKnown RBP14.27□□□□□ -0.13
HDAC6-227ENST00000485102 LLPHQ9BRT6 129 aaKnown RBP14.27□□□□□ -0.13
HDAC6-227ENST00000485102 MRPL4Q9BYD3 311 aaKnown RBP14.27□□□□□ -0.13
HDAC6-227ENST00000485102 TRPV4Q9HBA0 871 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 ZFP14Q9HCL3 533 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 HEBP1Q9NRV9 189 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 CNTN3Q9P232 1028 aa14.27□□□□□ -0.13
HDAC6-227ENST00000485102 PRR5-ARHGAP8B1AHC4 643 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 I3L4J1 428 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 PODXLO00592 558 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 PRRG1O14668 218 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 CEBPBP17676 345 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 TGM1P22735 817 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 CCT6AP40227 531 aaKnown RBP14.26□□□□□ -0.13
HDAC6-227ENST00000485102 ARHGAP8P85298 464 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 RSPO4Q2I0M5 234 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-227ENST00000485102 TTC38Q5R3I4 469 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 TAS1R3Q7RTX0 852 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 DAW1Q8N136 415 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 IRF7Q92985 503 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 C8orf76Q96K31 380 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 SUSD3Q96L08 255 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 ASB16Q96NS5 453 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 ACAP3Q96P50 834 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 TRMT61BQ9BVS5 477 aaKnown RBP14.26□□□□□ -0.13
HDAC6-227ENST00000485102 CHRDQ9H2X0 955 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 NCDNQ9UBB6 729 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 LRWD1Q9UFC0 647 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 AFF4Q9UHB7 1163 aaKnown RBP14.26□□□□□ -0.13
HDAC6-227ENST00000485102 KCNG1Q9UIX4 513 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 FBXL5Q9UKA1 691 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms