RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 STARD6P59095 220 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 OSTNP61366 133 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 MCL1Q07820 350 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 NOLC1Q14978 699 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCFD1-206ENST00000484733 ANGPT1Q15389 498 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 VARS2Q5ST30 1063 aaKnown RBP12.53□□□□□ -0.4
SCFD1-206ENST00000484733 PARM1Q6UWI2 310 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 ZBTB45Q96K62 511 aaPredicted RBP12.53□□□□□ -0.4
SCFD1-206ENST00000484733 SUSD3Q96L08 255 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 TSPAN18Q96SJ8 248 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 ARHGEF3Q9NR81 526 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 H3BQV1 296 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 ROR1Q01973 937 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 KYAT1Q16773 422 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 SLC10A6Q3KNW5 377 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 PABPC1LQ4VXU2 614 aaKnown RBP12.53□□□□□ -0.4
SCFD1-206ENST00000484733 TPGS2Q68CL5 300 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 ASCL5Q7RTU5 278 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 TCEAL8Q8IYN2 117 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 ITFG1Q8TB96 612 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 FGF14Q92915 247 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 SHDQ96IW2 340 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 CDK5RAP3Q96JB5 506 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 DLGAP2Q9P1A6 1054 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 ODF2LQ9ULJ1 636 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 MYH15Q9Y2K3 1946 aa12.52□□□□□ -0.4
SCFD1-206ENST00000484733 DOCK6Q96HP0 2047 aa12.52□□□□□ -0.41
SCFD1-206ENST00000484733 VWA3AA6NCI4 1184 aa12.52□□□□□ -0.41
SCFD1-206ENST00000484733 I3L4J1 428 aa12.52□□□□□ -0.41
SCFD1-206ENST00000484733 MICAL2O94851 1124 aa12.52□□□□□ -0.41
SCFD1-206ENST00000484733 ARSHQ5FYA8 562 aa12.52□□□□□ -0.41
SCFD1-206ENST00000484733 RPP25Q9BUL9 199 aaKnown RBP12.52□□□□□ -0.41
SCFD1-206ENST00000484733 DDX23Q9BUQ8 820 aaKnown RBP12.52□□□□□ -0.41
SCFD1-206ENST00000484733 GDE1Q9NZC3 331 aa12.52□□□□□ -0.41
SCFD1-206ENST00000484733 LARSQ9P2J5 1176 aaKnown RBP12.52□□□□□ -0.41
SCFD1-206ENST00000484733 WDFY4Q6ZS81 3184 aa12.52□□□□□ -0.41
SCFD1-206ENST00000484733 BMP15O95972 392 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 ATF2P15336 505 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 PTPN2P17706 415 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 CYP3A5P20815 502 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 RFX1P22670 979 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 PRKCQQ04759 706 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 FRMD5Q7Z6J6 570 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 NPAS3Q8IXF0 933 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 APPL2Q8NEU8 664 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 NKD2Q969F2 451 aaPredicted RBP12.51□□□□□ -0.41
SCFD1-206ENST00000484733 C18orf25Q96B23 403 aaPredicted RBP12.51□□□□□ -0.41
SCFD1-206ENST00000484733 OXCT2Q9BYC2 517 aaPredicted RBP12.51□□□□□ -0.41
SCFD1-206ENST00000484733 SEMA4AQ9H3S1 761 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 HCFC1R1Q9NWW0 138 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 PCDHB8Q9UN66 801 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 POLIQ9UNA4 740 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 SIT1Q9Y3P8 196 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 WDR27A2RRH5 827 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 STK25O00506 426 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 CLDN3O15551 220 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 ECI2O75521 394 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 PIGRP01833 764 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 ADRB2P07550 413 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 RHOP08100 348 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 CLTAP09496 248 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 LRPAP1P30533 357 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 ELF1P32519 619 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 GPC5P78333 572 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 ZBTB6Q15916 424 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 OSBPL6Q9BZF3 934 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 FBXL5Q9UKA1 691 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 NUB1Q9Y5A7 615 aa12.51□□□□□ -0.41
SCFD1-206ENST00000484733 CD2BP2O95400 341 aaKnown RBP12.5□□□□□ -0.41
SCFD1-206ENST00000484733 LRG1P02750 347 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 ZNF131P52739 623 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 PFKPQ01813 784 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 ZRSR1Q15695 479 aaKnown RBP12.5□□□□□ -0.41
SCFD1-206ENST00000484733 DDX12PQ92771 950 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 CALML4Q96GE6 196 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 PLIN2Q99541 437 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 HAPLN2Q9GZV7 340 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 SMC3Q9UQE7 1217 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 MRPS23Q9Y3D9 190 aaKnown RBP12.5□□□□□ -0.41
SCFD1-206ENST00000484733 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.5□□□□□ -0.41
SCFD1-206ENST00000484733 TTC26A0AVF1 554 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 M0QZQ0 153 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 HARSP12081 509 aaKnown RBP12.5□□□□□ -0.41
SCFD1-206ENST00000484733 ABCD1P33897 745 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 RAD51AP2Q09MP3 1159 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 PRSS36Q5K4E3 855 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 ZNF280DQ6N043 979 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 HAUS6Q7Z4H7 955 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 BRAPQ7Z569 592 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 PJA1Q8NG27 643 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 BORCS6Q96GS4 357 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 TBC1D32Q96NH3 1257 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 UPF2Q9HAU5 1272 aaKnown RBP12.5□□□□□ -0.41
SCFD1-206ENST00000484733 ANKFY1Q9P2R3 1169 aa12.5□□□□□ -0.41
SCFD1-206ENST00000484733 AFF4Q9UHB7 1163 aaKnown RBP12.5□□□□□ -0.41
SCFD1-206ENST00000484733 CACNA1HO95180 2353 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 NPHP3-ACAD11A0A0J9YXS1 232 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 ZNF197O14709 1029 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 PAX3P23760 479 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 LONP1P36776 959 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms