RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 PI4K2BG5E9Z4 385 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
MSH5-216ENST00000484309 DCXO43602 365 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 PRPF6O94906 941 aaKnown RBP13.37□□□□□ -0.27
MSH5-216ENST00000484309 SCP2P22307 547 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 FGFR3P22607 806 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 MCM4P33991 863 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 MTHFRP42898 656 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 ASIC1P78348 528 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 L1TD1Q5T7N2 865 aaKnown RBP13.37□□□□□ -0.27
MSH5-216ENST00000484309 RESP18Q5W5W9 173 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 GLIS3Q8NEA6 775 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 HVCN1Q96D96 273 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 DDX27Q96GQ7 796 aaKnown RBP13.37□□□□□ -0.27
MSH5-216ENST00000484309 RIPOR3Q96MK2 946 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 CLSTN3Q9BQT9 956 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 STRA6Q9BX79 667 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 TNMDQ9H2S6 317 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 FAM13BQ9NYF5 915 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 FNIP2Q9P278 1114 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 CPSF3Q9UKF6 684 aaKnown RBP13.37□□□□□ -0.27
MSH5-216ENST00000484309 NUB1Q9Y5A7 615 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 TECTAO75443 2155 aa13.37□□□□□ -0.27
MSH5-216ENST00000484309 NOTCH4Q99466 2003 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 CCDC195A0A1B0GUA6 201 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 FRMD3A2A2Y4 597 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 C2CD4DB7Z1M9 353 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 NFICP08651 508 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 ABCD1P33897 745 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 OR1D2P34982 312 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 AFMP43652 599 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 CREMQ03060 361 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 ATAT1Q5SQI0 421 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 ATL3Q6DD88 541 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 JADE1Q6IE81 842 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 RSPO2Q6UXX9 243 aaPredicted RBP13.36□□□□□ -0.27
MSH5-216ENST00000484309 GPR149Q86SP6 731 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 CCDC65Q8IXS2 484 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 GRAMD1CQ8IYS0 662 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 SYCP3Q8IZU3 236 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 IQUBQ8NA54 791 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 KREMEN2Q8NCW0 462 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 ZSWIM2Q8NEG5 633 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 NOC3LQ8WTT2 800 aaKnown RBP13.36□□□□□ -0.27
MSH5-216ENST00000484309 POMGNT1Q8WZA1 660 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 SAAL1Q96ER3 474 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 SPATA32Q96LK8 384 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 NECTIN4Q96NY8 510 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 ACCSQ96QU6 501 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 TRIM9Q9C026 710 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 BLZF1Q9H2G9 400 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 CUEDC2Q9H467 287 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 PLEKHA5Q9HAU0 1116 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 C11orf16Q9NQ32 467 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 OLFML3Q9NRN5 406 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 KBTBD4Q9NVX7 518 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 RCOR1Q9UKL0 485 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 AGO2Q9UKV8 859 aaKnown RBP13.36□□□□□ -0.27
MSH5-216ENST00000484309 CDY1Q9Y6F8 540 aa13.36□□□□□ -0.27
MSH5-216ENST00000484309 PPEF2O14830 753 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 TRAPPC3O43617 180 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 ALADP13716 330 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 ADSSP30520 456 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 RPL9P32969 192 aaKnown RBP13.35□□□□□ -0.27
MSH5-216ENST00000484309 KRT85P78386 507 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 BECN1Q14457 450 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 KYAT1Q16773 422 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 SLFN12LQ6IEE8 588 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 LILRA6Q6PI73 481 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 GPR65Q8IYL9 337 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 LEO1Q8WVC0 666 aaPredicted RBP13.35□□□□□ -0.27
MSH5-216ENST00000484309 SMG7Q92540 1137 aaKnown RBP13.35□□□□□ -0.27
MSH5-216ENST00000484309 C1QTNF1Q9BXJ1 281 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 MTRRQ9UBK8 725 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 SERTAD1Q9UHV2 236 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 RAPGEFL1Q9UHV5 662 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 FBXW11Q9UKB1 542 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 UBQLN1Q9UMX0 589 aaKnown RBP13.35□□□□□ -0.27
MSH5-216ENST00000484309 EXOC7Q9UPT5 735 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 PCDHB13Q9Y5F0 798 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 STYXL1Q9Y6J8 313 aa13.35□□□□□ -0.27
MSH5-216ENST00000484309 A0A1B0GVL5 298 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 GOLGA8IPA6NC78 632 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 GOLGA8JA6NMD2 632 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 ARPP19P56211 112 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 AMPD3Q01432 767 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 ZBTB6Q15916 424 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 TMEM31Q5JXX7 168 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 VARS2Q5ST30 1063 aaKnown RBP13.34□□□□□ -0.27
MSH5-216ENST00000484309 PDXDC1Q6P996 788 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 ELMSAN1Q6PJG2 1045 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 CRELD2Q6UXH1 353 aaPredicted RBP13.34□□□□□ -0.27
MSH5-216ENST00000484309 CCDC149Q6ZUS6 474 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 TDRD5Q8NAT2 981 aaKnown RBP13.34□□□□□ -0.27
MSH5-216ENST00000484309 ZNF707Q96C28 371 aaPredicted RBP13.34□□□□□ -0.27
MSH5-216ENST00000484309 FAM84AQ96KN4 292 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 CBWD1Q9BRT8 395 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 FAM213AQ9BRX8 229 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 LRFN3Q9BTN0 628 aa13.34□□□□□ -0.27
MSH5-216ENST00000484309 LRRC27Q9C0I9 530 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms