RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 SLC44A4Q53GD3 710 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 DAB2IPQ5VWQ8 1189 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 USP17L6PQ6QN14 398 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 JAMLQ86YT9 394 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 GLYCTKQ8IVS8 523 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 MKNK1Q9BUB5 465 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 STK32BQ9NY57 414 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 CLIC5Q9NZA1 410 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 IGSF9BQ9UPX0 1349 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 EIF3DO15371 548 aaKnown RBP eCLIP12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 PYGMP11217 842 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 GAP43P17677 238 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 VCAM1P19320 739 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 STX2P32856 288 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 HOXD12P35452 270 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 GPSM2P81274 684 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 ADCY1Q08828 1119 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 PRPF4BQ13523 1007 aaKnown RBP12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 SLC15A2Q16348 729 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 CFAP157Q5JU67 520 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 BTNL9Q6UXG8 535 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 OLFM3Q96PB7 478 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 PITPNM3Q9BZ71 974 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 ERVK-5Q9HDB9 667 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 TBC1D30Q9Y2I9 924 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 SUGT1Q9Y2Z0 365 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 ZNF711Q9Y462 761 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 DAGLAQ9Y4D2 1042 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 WASF2Q9Y6W5 498 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 ZMYM2Q9UBW7 1377 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 QSER1Q2KHR3 1735 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 EYA4O95677 639 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 ZFXP17010 805 aaPredicted RBP12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 ATP2B4P23634 1241 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 SLC16A2P36021 539 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 TCEAL1Q15170 157 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 SH3D19Q5HYK7 790 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 SIKE1Q9BRV8 207 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 ZNF180Q9UJW8 692 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 SYNGAP1Q96PV0 1343 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 TGFB1I1O43294 461 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 RIPK2O43353 540 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 PHF2O75151 1096 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 UFL1O94874 794 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 PSMG1O95456 288 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 PABPC4LP0CB38 370 aaKnown RBP12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 POTEJP0CG39 1038 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 CHRNA3P32297 505 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 PSMC2P35998 433 aaKnown RBP12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 PTGIRP43119 386 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 RASSF2P50749 326 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 YARSP54577 528 aaKnown RBP12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 SH3BGRP55822 239 aaPredicted RBP12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 KCNQ4P56696 695 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 ARHGAP4P98171 946 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 LMNB2Q03252 620 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 KLC3Q6P597 504 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 LENG9Q96B70 501 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 AGAP3Q96P47 875 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 GPR88Q9GZN0 384 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 GRHL1Q9NZI5 618 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 PARP2Q9UGN5 583 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 PCYOX1Q9UHG3 505 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 SERPINB13Q9UIV8 391 aa12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 RPL26L1Q9UNX3 145 aaKnown RBP12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 TDRKHQ9Y2W6 561 aaKnown RBP12.28□□□□□ -0.44
SEC61A1-205ENST00000483956 ANKRD62A6NC57 917 aa12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 MIF4GDA9UHW6 222 aaKnown RBP12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 TBCAO75347 108 aaKnown RBP12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 GCNT3O95395 438 aa12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 TAC1P20366 129 aa12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 FOXN2P32314 431 aa12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 GRIA2P42262 883 aa12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 MKRN3Q13064 507 aaKnown RBP12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 DRAP1Q14919 205 aaPredicted RBP12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 R3HDM1Q15032 1099 aaKnown RBP12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 QRICH1Q2TAL8 776 aa12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 C11orf63Q6NUN7 778 aa12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 FAM186BQ8IYM0 893 aa12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 FAM20AQ96MK3 541 aa12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 POLR3CQ9BUI4 534 aaPredicted RBP12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 DDX43Q9NXZ2 648 aaKnown RBP12.27□□□□□ -0.44
SEC61A1-205ENST00000483956 RSPH10B2B2RC85 870 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 MEIS1O00470 390 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 MEIS2O14770 477 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 GNPATO15228 680 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 TOM1O60784 492 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 RNASEH1O60930 286 aaKnown RBP12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 RSPH10BP0C881 870 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 RFX1P22670 979 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 PTPN4P29074 926 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 SHMT1P34896 483 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 CD97P48960 835 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 FMO5P49326 533 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 GSTM4Q03013 218 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 TNIP1Q15025 636 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 SYDE2Q5VT97 1194 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 MFSD5Q6N075 450 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 PHLDB3Q6NSJ2 640 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 KCTD1Q719H9 257 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms