RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 SPIDRQ14159 915 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 TAF5Q15542 800 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 FBXO47Q5MNV8 452 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 GLB1LQ6UWU2 654 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 NEK10Q6ZWH5 1172 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 CEP68Q76N32 757 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 MIGA2Q7L4E1 593 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 GET4Q7L5D6 327 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-214ENST00000483925 MIB1Q86YT6 1006 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 LIX1LQ8IVB5 337 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 NKAIN3Q8N8D7 197 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 RNF152Q8N8N0 203 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 ATG16L2Q8NAA4 619 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 TXNDC5Q8NBS9 432 aaKnown RBP5.14□□□□□ -1.59
PTCD3-214ENST00000483925 NRG4Q8WWG1 115 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 SEC14L1Q92503 715 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 PAWRQ96IZ0 340 aaKnown RBP5.14□□□□□ -1.59
PTCD3-214ENST00000483925 RSRC1Q96IZ7 334 aaKnown RBP5.14□□□□□ -1.59
PTCD3-214ENST00000483925 FAM167AQ96KS9 214 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 TREX2Q9BQ50 279 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-214ENST00000483925 SYT3Q9BQG1 590 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 STK33Q9BYT3 514 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 LMAN2LQ9H0V9 348 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 KCTD10Q9H3F6 313 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 PRKRIP1Q9H875 184 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-214ENST00000483925 NSMCE4AQ9NXX6 385 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 LRFN1Q9P244 771 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 GRHPRQ9UBQ7 328 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 DSEQ9UL01 958 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 COA3Q9Y2R0 106 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-214ENST00000483925 A6NLC8 198 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 C22orf46C9J442 243 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 KRIT1O00522 736 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 NKRFO15226 690 aaKnown RBP eCLIP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 HOXC11O43248 304 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 FSHBP01225 129 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 HARSP12081 509 aaKnown RBP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 EEF1GP26641 437 aaKnown RBP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 ITGA8P53708 1063 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 ATXN1P54253 815 aaKnown RBP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 LGALS4P56470 323 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 CNGA2Q16280 664 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 CCDC30Q5VVM6 783 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 MBLAC2Q68D91 279 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 FSTL4Q6MZW2 842 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 GALNT5Q7Z7M9 940 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 STK32CQ86UX6 486 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 LRRTM4Q86VH4 590 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 TMTC1Q8IUR5 882 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 TXLNBQ8N3L3 684 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 LSMEM1Q8N8F7 131 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 CENPIQ92674 756 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 DVL3Q92997 716 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 MUL1Q969V5 352 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 SUCLG2Q96I99 432 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 LCORQ96JN0 433 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 BARD1Q99728 777 aaKnown RBP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 SSBP3Q9BWW4 388 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 SORBS1Q9BX66 1292 aaKnown RBP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 EIF2AQ9BY44 585 aaKnown RBP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 C14orf93Q9H972 538 aaKnown RBP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 SERHLQ9NQF3 203 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 OLA1Q9NTK5 396 aaKnown RBP5.13□□□□□ -1.59
PTCD3-214ENST00000483925 BTG4Q9NY30 223 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 SRRDQ9UH36 339 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 FBXL7Q9UJT9 491 aa5.13□□□□□ -1.59
PTCD3-214ENST00000483925 A0A1W2PPC4 97 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 UBA6A0AVT1 1052 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-214ENST00000483925 SYT5O00445 386 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 ZBED4O75132 1171 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 ARIH2O95376 493 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 POLBP06746 335 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 CNTFP26441 200 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 SLC7A1P30825 629 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 KRT20P35900 424 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 SERPINF1P36955 418 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 SLC6A11P48066 632 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 HK3P52790 923 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 ITGA1P56199 1179 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 CDK17Q00537 523 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 FMO1Q01740 532 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 TLE2Q04725 743 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 GALNT1Q10472 559 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-214ENST00000483925 SURF1Q15526 300 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 SLC35G1Q2M3R5 365 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 SLC45A4Q5BKX6 768 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 MUM1L1Q5H9M0 696 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 PRR31Q5SQ13 230 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 ANKRD45Q5TZF3 282 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 CYP4F22Q6NT55 531 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 BEND5Q7L4P6 421 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 MILR1Q7Z6M3 343 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 Q8N1Y9 231 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 ATP11CQ8NB49 1132 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 SLC16A11Q8NCK7 471 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 IL31RAQ8NI17 732 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 ADAMTS18Q8TE60 1221 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 SH3RF2Q8TEC5 729 aa5.12□□□□□ -1.59
PTCD3-214ENST00000483925 ASB12Q8WXK4 309 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms