RNA–Protein interactions for RNA: ENST00000483787.5

FAM3D-203, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 5

Gene FAM3D, Length 737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-203ENST00000483787 BRCC3P46736 316 aa12.8□□□□□ -0.36
FAM3D-203ENST00000483787 TFAMQ00059 246 aaKnown RBP12.8□□□□□ -0.36
FAM3D-203ENST00000483787 SMC1AQ14683 1233 aaKnown RBP12.8□□□□□ -0.36
FAM3D-203ENST00000483787 SKIV2LQ15477 1246 aaKnown RBP12.8□□□□□ -0.36
FAM3D-203ENST00000483787 SNRNP35Q16560 246 aaKnown RBP12.8□□□□□ -0.36
FAM3D-203ENST00000483787 SPATA1Q5VX52 437 aa12.8□□□□□ -0.36
FAM3D-203ENST00000483787 LMBRD2Q68DH5 695 aaPredicted RBP12.8□□□□□ -0.36
FAM3D-203ENST00000483787 DCLRE1AQ6PJP8 1040 aa12.8□□□□□ -0.36
FAM3D-203ENST00000483787 RBM23Q86U06 439 aaKnown RBP12.8□□□□□ -0.36
FAM3D-203ENST00000483787 BEST2Q8NFU1 509 aa12.8□□□□□ -0.36
FAM3D-203ENST00000483787 DDX27Q96GQ7 796 aaKnown RBP12.8□□□□□ -0.36
FAM3D-203ENST00000483787 B3GALT6Q96L58 329 aa12.8□□□□□ -0.36
FAM3D-203ENST00000483787 KIAA1586Q9HCI6 787 aa12.8□□□□□ -0.36
FAM3D-203ENST00000483787 NGRNQ9NPE2 291 aaKnown RBP12.8□□□□□ -0.36
FAM3D-203ENST00000483787 PRDM6Q9NQX0 595 aa12.8□□□□□ -0.36
FAM3D-203ENST00000483787 DMAC2Q9NW81 257 aa12.8□□□□□ -0.36
FAM3D-203ENST00000483787 KIAA1468Q9P260 1216 aa12.8□□□□□ -0.36
FAM3D-203ENST00000483787 TRAF3IP3Q9Y228 551 aa12.8□□□□□ -0.36
FAM3D-203ENST00000483787 DERAQ9Y315 318 aa12.8□□□□□ -0.36
FAM3D-203ENST00000483787 C2CD2Q9Y426 696 aa12.8□□□□□ -0.36
FAM3D-203ENST00000483787 REV3LO60673 3130 aa12.8□□□□□ -0.36
FAM3D-203ENST00000483787 SF3B1O75533 1304 aaKnown RBP eCLIP12.8□□□□□ -0.36
FAM3D-203ENST00000483787 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.79□□□□□ -0.36
FAM3D-203ENST00000483787 C2orf71A6NGG8 1288 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 I3L4J1 428 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 C2CD2LO14523 706 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 PER2O15055 1255 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 SLC34A2O95436 690 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 CXCL14O95715 111 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 URODP06132 367 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 CD44P16070 742 aaKnown RBP12.79□□□□□ -0.36
FAM3D-203ENST00000483787 CYP3A5P20815 502 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 RPL9P32969 192 aaKnown RBP12.79□□□□□ -0.36
FAM3D-203ENST00000483787 NRIP1P48552 1158 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 CASP4P49662 377 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 CYP24A1Q07973 514 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 HYAL1Q12794 435 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 MORC3Q14149 939 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 PTPN14Q15678 1187 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 ZCWPW2Q504Y3 356 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 COBLL1Q53SF7 1204 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 PDE12Q6L8Q7 609 aaKnown RBP12.79□□□□□ -0.36
FAM3D-203ENST00000483787 SLC9A9Q8IVB4 645 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 TSPAN18Q96SJ8 248 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 NUP62CLQ9H1M0 184 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 IGFLR1Q9H665 355 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 PTPRJQ12913 1337 aa12.79□□□□□ -0.36
FAM3D-203ENST00000483787 PRUNE2Q8WUY3 3088 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 TRIM49BA6NDI0 452 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 DLATP10515 647 aaKnown RBP12.78□□□□□ -0.36
FAM3D-203ENST00000483787 NR2F2P24468 414 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 MCM4P33991 863 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 GLUD2P49448 558 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 PMS1P54277 932 aaKnown RBP12.78□□□□□ -0.36
FAM3D-203ENST00000483787 BMS1Q14692 1282 aaKnown RBP12.78□□□□□ -0.36
FAM3D-203ENST00000483787 USP41Q3LFD5 358 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 RTP2Q5QGT7 225 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 FAM171A1Q5VUB5 890 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 C9orf57Q5W0N0 161 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 CEP135Q66GS9 1140 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 KLHL10Q6JEL2 608 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 CEP57Q86XR8 500 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 ADSSL1Q8N142 457 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 MRPL43Q8N983 215 aaKnown RBP12.78□□□□□ -0.36
FAM3D-203ENST00000483787 PPP2R3CQ969Q6 453 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 CCDC127Q96BQ5 260 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 GTPBP4Q9BZE4 634 aaKnown RBP12.78□□□□□ -0.36
FAM3D-203ENST00000483787 MTMR12Q9C0I1 747 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 TLE6Q9H808 572 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 MRPL17Q9NRX2 175 aaKnown RBP12.78□□□□□ -0.36
FAM3D-203ENST00000483787 CHST7Q9NS84 486 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 DPP3Q9NY33 737 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 STK39Q9UEW8 545 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 NUB1Q9Y5A7 615 aa12.78□□□□□ -0.36
FAM3D-203ENST00000483787 LINC01565O15544 149 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 LILRB3O75022 631 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 TMEM191BP0C7N4 346 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 TKTP29401 623 aaKnown RBP12.77□□□□□ -0.37
FAM3D-203ENST00000483787 RBM10P98175 930 aaKnown RBP12.77□□□□□ -0.37
FAM3D-203ENST00000483787 DSG1Q02413 1049 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 ELAVL2Q12926 359 aaKnown RBP12.77□□□□□ -0.37
FAM3D-203ENST00000483787 STIM1Q13586 685 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 MYBPC2Q14324 1141 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 PSMD6Q15008 389 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 SURF1Q15526 300 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 NFIL3Q16649 462 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 DUSP6Q16828 381 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 KIAA0319Q5VV43 1072 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 ANKRD40Q6AI12 368 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 SCARA3Q6AZY7 606 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 CENPPQ6IPU0 288 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 KIAA1841Q6NSI8 718 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 PRSS55Q6UWB4 352 aaPredicted RBP12.77□□□□□ -0.37
FAM3D-203ENST00000483787 EP400NLQ6ZTU2 488 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 NT5DC4Q86YG4 428 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 C1orf127Q8N9H9 656 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 OR5B17Q8NGF7 314 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 PLEKHO2Q8TD55 490 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 TMEM174Q8WUU8 243 aa12.77□□□□□ -0.37
FAM3D-203ENST00000483787 RIN2Q8WYP3 895 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms