RNA–Protein interactions for RNA: ENST00000483342.5

SNHG11-215, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 1 (best)

Gene SNHG11, Length 1,509 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-215ENST00000483342 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.33■□□□□ 0.52
SNHG11-215ENST00000483342 MICAL3Q7RTP6 2002 aa18.32■□□□□ 0.52
SNHG11-215ENST00000483342 KRT19P08727 400 aa18.32■□□□□ 0.52
SNHG11-215ENST00000483342 CYP3A5P20815 502 aa18.32■□□□□ 0.52
SNHG11-215ENST00000483342 MXI1P50539 228 aa18.32■□□□□ 0.52
SNHG11-215ENST00000483342 MIIPQ5JXC2 388 aa18.32■□□□□ 0.52
SNHG11-215ENST00000483342 FKBP15Q5T1M5 1219 aa18.32■□□□□ 0.52
SNHG11-215ENST00000483342 TRAPPC11Q7Z392 1133 aa18.32■□□□□ 0.52
SNHG11-215ENST00000483342 TUBGCP4Q9UGJ1 667 aa18.32■□□□□ 0.52
SNHG11-215ENST00000483342 INSL6Q9Y581 213 aa18.32■□□□□ 0.52
SNHG11-215ENST00000483342 GUCY2FP51841 1108 aa18.31■□□□□ 0.52
SNHG11-215ENST00000483342 MYL7Q01449 175 aa18.31■□□□□ 0.52
SNHG11-215ENST00000483342 TUSC3Q13454 348 aa18.31■□□□□ 0.52
SNHG11-215ENST00000483342 TRPC3Q13507 836 aa18.31■□□□□ 0.52
SNHG11-215ENST00000483342 BTG3Q14201 252 aaPredicted RBP18.31■□□□□ 0.52
SNHG11-215ENST00000483342 CBWD6Q4V339 395 aa18.31■□□□□ 0.52
SNHG11-215ENST00000483342 CBWD3Q5JTY5 395 aa18.31■□□□□ 0.52
SNHG11-215ENST00000483342 CBWD5Q5RIA9 395 aa18.31■□□□□ 0.52
SNHG11-215ENST00000483342 TDRD10Q5VZ19 366 aaKnown RBP18.31■□□□□ 0.52
SNHG11-215ENST00000483342 APTXQ7Z2E3 356 aaKnown RBP18.31■□□□□ 0.52
SNHG11-215ENST00000483342 ZNF689Q96CS4 500 aaPredicted RBP18.31■□□□□ 0.52
SNHG11-215ENST00000483342 RAD9AQ99638 391 aa18.31■□□□□ 0.52
SNHG11-215ENST00000483342 IFNKQ9P0W0 207 aa18.31■□□□□ 0.52
SNHG11-215ENST00000483342 TLL1O43897 1013 aa18.3■□□□□ 0.52
SNHG11-215ENST00000483342 DDHD2O94830 711 aa18.3■□□□□ 0.52
SNHG11-215ENST00000483342 ITGB3P05106 788 aa18.3■□□□□ 0.52
SNHG11-215ENST00000483342 BMP8BP34820 402 aa18.3■□□□□ 0.52
SNHG11-215ENST00000483342 UBXN1Q04323 297 aa18.3■□□□□ 0.52
SNHG11-215ENST00000483342 SOX4Q06945 474 aaPredicted RBP18.3■□□□□ 0.52
SNHG11-215ENST00000483342 ZACNQ401N2 412 aa18.3■□□□□ 0.52
SNHG11-215ENST00000483342 SPOUT1Q5T280 376 aaKnown RBP18.3■□□□□ 0.52
SNHG11-215ENST00000483342 CHRDL2Q6WN34 429 aa18.3■□□□□ 0.52
SNHG11-215ENST00000483342 ZNF280BQ86YH2 543 aa18.3■□□□□ 0.52
SNHG11-215ENST00000483342 CMTR2Q8IYT2 770 aaKnown RBP18.3■□□□□ 0.52
SNHG11-215ENST00000483342 LRRC43Q8N309 656 aa18.3■□□□□ 0.52
SNHG11-215ENST00000483342 C1orf127Q8N9H9 656 aa18.3■□□□□ 0.52
SNHG11-215ENST00000483342 NAP1L5Q96NT1 182 aaPredicted RBP18.3■□□□□ 0.52
SNHG11-215ENST00000483342 GOLGA2P5Q9HBQ8 144 aa18.3■□□□□ 0.52
SNHG11-215ENST00000483342 ITGA11Q9UKX5 1188 aa18.3■□□□□ 0.52
SNHG11-215ENST00000483342 CASTOR2A6NHX0 329 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 LGALS16A8MUM7 142 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 P4HA2O15460 535 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 CBFA2T2O43439 604 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 CLSTN1O94985 981 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 CST3P01034 146 aaPredicted RBP18.29■□□□□ 0.52
SNHG11-215ENST00000483342 ALDH2P05091 517 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 TPM3P06753 285 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 RPL9P32969 192 aaKnown RBP18.29■□□□□ 0.52
SNHG11-215ENST00000483342 RBP5P82980 135 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 NAB2Q15742 525 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 C15orf39Q6ZRI6 1047 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 FBXL13Q8NEE6 735 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 DDX27Q96GQ7 796 aaKnown RBP18.29■□□□□ 0.52
SNHG11-215ENST00000483342 TRIM5Q9C035 493 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 NRDE2Q9H7Z3 1164 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 RTN4Q9NQC3 1192 aaKnown RBP18.29■□□□□ 0.52
SNHG11-215ENST00000483342 AGAP1Q9UPQ3 857 aa18.29■□□□□ 0.52
SNHG11-215ENST00000483342 A0A1B0GTH6 734 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 PMM2O15305 246 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 ZC3H11AO75152 810 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNHG11-215ENST00000483342 HLA-DRAP01903 254 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 POLR2BP30876 1174 aaKnown RBP18.28■□□□□ 0.52
SNHG11-215ENST00000483342 PIK3CAP42336 1068 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 HTRA4P83105 476 aaPredicted RBP18.28■□□□□ 0.52
SNHG11-215ENST00000483342 CCDC173Q0VFZ6 552 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 NCOA4Q13772 614 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 GBP6Q6ZN66 633 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 COLGALT2Q8IYK4 626 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 TMEM130Q8N3G9 435 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 CCDC150Q8NCX0 1101 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 TAS1R2Q8TE23 839 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 UROC1Q96N76 676 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 RAB20Q9NX57 234 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 CITO14578 2027 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 LRPAP1P30533 357 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 OR1G1P47890 313 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 CLCNKBP51801 687 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 DSC1Q08554 894 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 NR1I3Q14994 352 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 EXOC3L4Q17RC7 722 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 C9orf57Q5W0N0 161 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 FIBCD1Q8N539 461 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 CRACR2AQ9BSW2 395 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 IMPG2Q9BZV3 1241 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 CACNG4Q9UBN1 327 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 DNAJB4Q9UDY4 337 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 SIX4Q9UIU6 781 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 FAN1Q9Y2M0 1017 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 COQ4Q9Y3A0 265 aa18.28■□□□□ 0.52
SNHG11-215ENST00000483342 RANBP2P49792 3224 aaKnown RBP18.27■□□□□ 0.52
SNHG11-215ENST00000483342 ANO9A1A5B4 782 aa18.27■□□□□ 0.51
SNHG11-215ENST00000483342 GTPBP10A4D1E9 387 aaKnown RBP18.27■□□□□ 0.51
SNHG11-215ENST00000483342 PODXLO00592 558 aa18.27■□□□□ 0.51
SNHG11-215ENST00000483342 TEX33O43247 280 aa18.27■□□□□ 0.51
SNHG11-215ENST00000483342 VNN1O95497 513 aa18.27■□□□□ 0.51
SNHG11-215ENST00000483342 ALDH7A1P49419 539 aaKnown RBP18.27■□□□□ 0.51
SNHG11-215ENST00000483342 RABGGTBP53611 331 aa18.27■□□□□ 0.51
SNHG11-215ENST00000483342 MYO1EQ12965 1108 aa18.27■□□□□ 0.51
SNHG11-215ENST00000483342 SGSM1Q2NKQ1 1148 aa18.27■□□□□ 0.51
SNHG11-215ENST00000483342 WDR44Q5JSH3 913 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms