RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 DNAJC17Q9NVM6 304 aaKnown RBP8.28□□□□□ -1.08
COL4A5-205ENST00000483338 TAS2R1Q9NYW7 299 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 PCDHGB4Q9UN71 923 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 MAP3K2Q9Y2U5 619 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 PCDHGB5Q9Y5G0 923 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 PFASO15067 1338 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 SFI1A8K8P3 1242 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 ATP5J2-PTCD1G3V325 749 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 PTCD1O75127 700 aaKnown RBP8.28□□□□□ -1.08
COL4A5-205ENST00000483338 MMP1P03956 469 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 RPN1P04843 607 aaKnown RBP8.28□□□□□ -1.08
COL4A5-205ENST00000483338 ZNF12P17014 697 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 NCOA4Q13772 614 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 NTRK3Q16288 839 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 SLC45A4Q5BKX6 768 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 PDXDC2PQ6P474 469 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 CLEC4GQ6UXB4 293 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 ZSCAN29Q8IWY8 852 aaPredicted RBP8.28□□□□□ -1.08
COL4A5-205ENST00000483338 NOC4LQ9BVI4 516 aaKnown RBP8.28□□□□□ -1.08
COL4A5-205ENST00000483338 PIH1D3Q9NQM4 214 aaKnown RBP8.28□□□□□ -1.08
COL4A5-205ENST00000483338 SIK3Q9Y2K2 1263 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 SNX24Q9Y343 169 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 KCNQ3O43525 872 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 TMCC2O75069 709 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 ZBED4O75132 1171 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 CHEK2O96017 543 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 SUZ12Q15022 739 aaKnown RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 FAM98CQ17RN3 349 aaKnown RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 LPCAT4Q643R3 524 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 TTI2Q6NXR4 508 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 RHOT2Q8IXI1 618 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 CRACR2BQ8N4Y2 399 aaPredicted RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 CPSF7Q8N684 471 aaKnown RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 EXD1Q8NHP7 514 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 PIP4K2CQ8TBX8 421 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 CCDC110Q8TBZ0 833 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 SUN5Q8TC36 379 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 BAP1Q92560 729 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 BIRC8Q96P09 236 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 XAB2Q9HCS7 855 aaKnown RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 TBC1D23Q9NUY8 699 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 ARIH1Q9Y4X5 557 aaPredicted RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 PCDHGA8Q9Y5G5 932 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 F8W8V4 182 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 GTPBP6O43824 516 aaPredicted RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 ZBTB11O95625 1053 aaPredicted RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 CYP1A2P05177 515 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 HSPA1AP0DMV8 641 aaKnown RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 HSPA1BP0DMV9 641 aaKnown RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 GUCY1A2P33402 732 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 WDR4P57081 412 aaKnown RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 FKBP4Q02790 459 aaKnown RBP eCLIP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 STRN3Q13033 797 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 PDAP1Q13442 181 aaKnown RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 ATP1A4Q13733 1029 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 OGFOD2Q6N063 350 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 ITIH5Q86UX2 942 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 LRRC6Q86X45 466 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 GLG1Q92896 1179 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 ZFRQ96KR1 1074 aaKnown RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 CNOT6LQ96LI5 555 aaKnown RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 PANX3Q96QZ0 392 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 TCF12Q99081 682 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 SPZ1Q9BXG8 430 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 RTFDC1Q9BY42 306 aaPredicted RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 FKBP14Q9NWM8 211 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 NCKIPSDQ9NZQ3 722 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 MYOCOSA0A1B0GUC4 107 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 SSU72P8A0A1W2PR75 194 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 TXNDC9O14530 226 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 MAGEB2O15479 319 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 B4GALT4O60513 344 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 FOXD2O60548 495 aaPredicted RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 ZWINTO95229 277 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 PARNO95453 639 aaKnown RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 IL2RBP14784 551 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 HMOX2P30519 316 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 COPB2P35606 906 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 AP2B1P63010 937 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 TDRD12Q587J7 1177 aaKnown RBP8.27□□□□□ -1.09
COL4A5-205ENST00000483338 NANOGP8Q6NSW7 305 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 ARHGEF18Q6ZSZ5 1173 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 NLRP10Q86W26 655 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 RASGEF1CQ8N431 466 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 CSGALNACT2Q8N6G5 542 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 MED30Q96HR3 178 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 FBXL18Q96ME1 805 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 FAM161BQ96MY7 647 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 ANKRD2Q9GZV1 360 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 ZNF287Q9HBT7 754 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 LGR6Q9HBX8 967 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 UBN1Q9NPG3 1134 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 DNAJB4Q9UDY4 337 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 POU2F3Q9UKI9 436 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 DNAJC16Q9Y2G8 782 aa8.27□□□□□ -1.09
COL4A5-205ENST00000483338 CPDO75976 1380 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 KIAA0391O15091 583 aaKnown RBP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 FARP2O94887 1054 aaPredicted RBP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 DDX58O95786 925 aaKnown RBP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 RAP1GDS1P52306 607 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms