RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 BCS1LQ9Y276 419 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 ZMYM2Q9UBW7 1377 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 MAST2Q6P0Q8 1798 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 UMODL1Q5DID0 1318 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 QSER1Q2KHR3 1735 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 TRIM49P0CI25 452 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 TRIM49CP0CI26 452 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 IL6STP40189 918 aaPredicted RBP12.54□□□□□ -0.4
VTI1A-205ENST00000483122 PTK6Q13882 451 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 KIF22Q14807 665 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 MAPK6Q16659 721 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 IZUMO2Q6UXV1 221 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 FAM186BQ8IYM0 893 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 VPS52Q8N1B4 723 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 ZNF75CPQ92670 426 aaPredicted RBP12.54□□□□□ -0.4
VTI1A-205ENST00000483122 SLCO2A1Q92959 643 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 HERPUD2Q9BSE4 406 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 MXD3Q9BW11 206 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 INTS2Q9H0H0 1204 aaKnown RBP12.54□□□□□ -0.4
VTI1A-205ENST00000483122 TMEM165Q9HC07 324 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 KIAA1586Q9HCI6 787 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 STK32BQ9NY57 414 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 TFCP2L1Q9NZI6 479 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 A6NJR5 290 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 POC1B-GALNT4F8VUJ3 575 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 PRPF4O43172 522 aaKnown RBP eCLIP12.53□□□□□ -0.4
VTI1A-205ENST00000483122 TGFB1I1O43294 461 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 HNRNPCL1O60812 293 aaKnown RBP12.53□□□□□ -0.4
VTI1A-205ENST00000483122 HAUS5O94927 633 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 GCNT3O95395 438 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 FAM200BP0CF97 657 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 ATF2P15336 505 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 RRM1P23921 792 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 RPL13P26373 211 aaKnown RBP12.53□□□□□ -0.4
VTI1A-205ENST00000483122 ADCY8P40145 1251 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 CDK7P50613 346 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 PHLDB3Q6NSJ2 640 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 FBXO33Q7Z6M2 555 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 MCUR1Q96AQ8 359 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 NSL1Q96IY1 281 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 CCDC77Q9BR77 488 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 TRAIPQ9BWF2 469 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 RIOX1Q9H6W3 641 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 PCDHGA4Q9Y5G9 962 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 COMMD3-BMI1R4GMX3 469 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 hCG_2014768A0A024R1R8 64 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 WDR91A4D1P6 747 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 HNRNPRO43390 633 aaKnown RBP12.53□□□□□ -0.4
VTI1A-205ENST00000483122 SORBS3O60504 671 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 CA4P22748 312 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 C1QTNF12Q5T7M4 302 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 ACBD5Q5T8D3 534 aaPredicted RBP12.53□□□□□ -0.4
VTI1A-205ENST00000483122 PDCD7Q8N8D1 485 aaKnown RBP12.53□□□□□ -0.4
VTI1A-205ENST00000483122 MRRFQ96E11 262 aaKnown RBP12.53□□□□□ -0.4
VTI1A-205ENST00000483122 RBM17Q96I25 401 aaKnown RBP12.53□□□□□ -0.4
VTI1A-205ENST00000483122 PCDHB18PQ96TA0 734 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 CENPKQ9BS16 269 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 PICK1Q9NRD5 415 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 RHBDL2Q9NX52 303 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 TAS2R1Q9NYW7 299 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 LARSQ9P2J5 1176 aaKnown RBP12.53□□□□□ -0.4
VTI1A-205ENST00000483122 HEY2Q9UBP5 337 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 APEX2Q9UBZ4 518 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 BLOC1S6Q9UL45 172 aa12.53□□□□□ -0.4
VTI1A-205ENST00000483122 EXOC1LA0A1B0GW35 172 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 GSTTP1A0A1W2PQM5 241 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 SFI1A8K8P3 1242 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 FSCN2O14926 492 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 RNASEH1O60930 286 aaKnown RBP12.52□□□□□ -0.4
VTI1A-205ENST00000483122 RPS6KA4O75676 772 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 ZWINTO95229 277 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 CETN2P41208 172 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 BPIFB4P59827 614 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 DEUP1Q05D60 604 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 COG2Q14746 738 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 DAB2IPQ5VWQ8 1189 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 LVRNQ6Q4G3 990 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 NSMFQ6X4W1 530 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 C3orf67Q6ZVT6 689 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 MARK2Q7KZI7 788 aaKnown RBP12.52□□□□□ -0.4
VTI1A-205ENST00000483122 PSPC1Q8WXF1 523 aaKnown RBP12.52□□□□□ -0.4
VTI1A-205ENST00000483122 FBXO6Q9NRD1 293 aaPredicted RBP12.52□□□□□ -0.4
VTI1A-205ENST00000483122 HSFX1Q9UBD0 423 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 TBC1D30Q9Y2I9 924 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 C10orf71Q711Q0 1435 aa12.52□□□□□ -0.4
VTI1A-205ENST00000483122 A0A0G2JND7 137 aa12.52□□□□□ -0.41
VTI1A-205ENST00000483122 A0A1W2PPM1 405 aa12.52□□□□□ -0.41
VTI1A-205ENST00000483122 GNPATO15228 680 aa12.52□□□□□ -0.41
VTI1A-205ENST00000483122 KRT15P19012 456 aa12.52□□□□□ -0.41
VTI1A-205ENST00000483122 POLD1P28340 1107 aa12.52□□□□□ -0.41
VTI1A-205ENST00000483122 GRIA2P42262 883 aa12.52□□□□□ -0.41
VTI1A-205ENST00000483122 PIK3CAP42336 1068 aa12.52□□□□□ -0.41
VTI1A-205ENST00000483122 TCEAL1Q15170 157 aa12.52□□□□□ -0.41
VTI1A-205ENST00000483122 HP1BP3Q5SSJ5 553 aaPredicted RBP12.52□□□□□ -0.41
VTI1A-205ENST00000483122 FYB2Q5VWT5 728 aa12.52□□□□□ -0.41
VTI1A-205ENST00000483122 ZNF365Q70YC5 407 aa12.52□□□□□ -0.41
VTI1A-205ENST00000483122 TGFBRAP1Q8WUH2 860 aa12.52□□□□□ -0.41
VTI1A-205ENST00000483122 NAT14Q8WUY8 206 aa12.52□□□□□ -0.41
VTI1A-205ENST00000483122 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms