RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 M0R296 226 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 ADRB2P07550 413 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 ADSSP30520 456 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 OR1D2P34982 312 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 YARSP54577 528 aaKnown RBP13.18□□□□□ -0.3
HDLBP-239ENST00000483086 AXDND1Q5T1B0 1012 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-239ENST00000483086 RRAGBQ5VZM2 374 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 SHC4Q6S5L8 630 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 CRELD2Q6UXH1 353 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-239ENST00000483086 ZNF720Q7Z2F6 126 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 ZDHHC14Q8IZN3 488 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 PDILTQ8N807 584 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 KRI1Q8N9T8 703 aaKnown RBP13.18□□□□□ -0.3
HDLBP-239ENST00000483086 RASSF8Q8NHQ8 419 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 HPS3Q969F9 1004 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 FAM84AQ96KN4 292 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 UROC1Q96N76 676 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 ZSCAN16Q9H4T2 348 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-239ENST00000483086 WDR6Q9NNW5 1121 aaKnown RBP13.18□□□□□ -0.3
HDLBP-239ENST00000483086 TOPORSQ9NS56 1045 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-239ENST00000483086 TBC1D7Q9P0N9 293 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 STK17AQ9UEE5 414 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 CPSF3Q9UKF6 684 aaKnown RBP13.18□□□□□ -0.3
HDLBP-239ENST00000483086 NR2E1Q9Y466 385 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 CDY1Q9Y6F8 540 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 CLUHO75153 1309 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 FRMD3A2A2Y4 597 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 HNRNPDLO14979 420 aaKnown RBP13.17□□□□□ -0.3
HDLBP-239ENST00000483086 ZMYND10O75800 440 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 F13A1P00488 732 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 KRT18P05783 430 aaKnown RBP13.17□□□□□ -0.3
HDLBP-239ENST00000483086 LIG4P49917 911 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 VCPP55072 806 aaKnown RBP13.17□□□□□ -0.3
HDLBP-239ENST00000483086 RAB33AQ14088 237 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 MRPL58Q14197 206 aaKnown RBP13.17□□□□□ -0.3
HDLBP-239ENST00000483086 VARS2Q5ST30 1063 aaKnown RBP13.17□□□□□ -0.3
HDLBP-239ENST00000483086 IER5LQ5T953 404 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 CCDC149Q6ZUS6 474 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 TDRD5Q8NAT2 981 aaKnown RBP13.17□□□□□ -0.3
HDLBP-239ENST00000483086 HDAC7Q8WUI4 952 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 RSAD2Q8WXG1 361 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 SMG7Q92540 1137 aaKnown RBP13.17□□□□□ -0.3
HDLBP-239ENST00000483086 BICD1Q96G01 975 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 RHOBTB2Q9BYZ6 727 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 PRKD2Q9BZL6 878 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 ST6GALNAC4Q9H4F1 302 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 PLEKHA4Q9H4M7 779 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 HCFC1R1Q9NWW0 138 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 USTQ9Y2C2 406 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 ZDHHC9Q9Y397 364 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 STYXL1Q9Y6J8 313 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 WDR87Q6ZQQ6 2873 aa13.17□□□□□ -0.3
HDLBP-239ENST00000483086 WDR27A2RRH5 827 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 SPTLC1O15269 473 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 SPTLC2O15270 562 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 OGTO15294 1046 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 TBCAO75347 108 aaKnown RBP13.16□□□□□ -0.3
HDLBP-239ENST00000483086 VNN2O95498 520 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 C1RP00736 705 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 NFICP08651 508 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 CLTAP09496 248 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 ZSCAN22P10073 491 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-239ENST00000483086 CASP1P29466 404 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 LRPAP1P30533 357 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 MATR3P43243 847 aaKnown RBP eCLIP13.16□□□□□ -0.3
HDLBP-239ENST00000483086 ACOT2P49753 483 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 SIGLEC14Q08ET2 396 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 STK38Q15208 465 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 JADE1Q6IE81 842 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 APBB1IPQ7Z5R6 666 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-239ENST00000483086 BMP8AQ7Z5Y6 402 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 BACE2Q9Y5Z0 518 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 CACNA1HO95180 2353 aa13.16□□□□□ -0.3
HDLBP-239ENST00000483086 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 CCL16O15467 120 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 NARSO43776 548 aaKnown RBP13.15□□□□□ -0.3
HDLBP-239ENST00000483086 PPP6R2O75170 966 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 SEC24AO95486 1093 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 C8AP07357 584 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 HOXD13P35453 343 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 STAT6P42226 847 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 AARSP49588 968 aaKnown RBP eCLIP13.15□□□□□ -0.3
HDLBP-239ENST00000483086 ROR1Q01973 937 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 ELAVL2Q12926 359 aaKnown RBP13.15□□□□□ -0.3
HDLBP-239ENST00000483086 SLC8B1Q6J4K2 584 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 SV2BQ7L1I2 683 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 GRASPQ7Z6J2 395 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-239ENST00000483086 HSCBQ8IWL3 235 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 EFCAB13Q8IY85 973 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 ITFG1Q8TB96 612 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 SLC7A14Q8TBB6 771 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 SUSD3Q96L08 255 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 MSTO1Q9BUK6 570 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 PLEKHA5Q9HAU0 1116 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 KCNK12Q9HB15 430 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 SLC38A7Q9NVC3 462 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 ZDHHC7Q9NXF8 308 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 CCDC39Q9UFE4 941 aa13.15□□□□□ -0.3
HDLBP-239ENST00000483086 FBXL5Q9UKA1 691 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms