RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 RPUSD3Q6P087 351 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 TATDN1Q6P1N9 297 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 NFRKBQ6P4R8 1299 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 ZNF783Q6ZMS7 281 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 BBS12Q6ZW61 710 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 NLRP14Q86W24 1093 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 CHD1LQ86WJ1 897 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 CCDC105Q8IYK2 499 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 RTKN2Q8IZC4 609 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 ADGRG2Q8IZP9 1017 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 GOLGA6L1Q8N7Z2 621 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 SPC24Q8NBT2 197 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 OR6B3Q8NGW1 331 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 GOT1L1Q8NHS2 421 aaPredicted RBP5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 NMD3Q96D46 503 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 SNX22Q96L94 193 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 PRPF18Q99633 342 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 MIPEPQ99797 713 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 NOL10Q9BSC4 688 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 TRIM5Q9C035 493 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 EPB41L1Q9H4G0 881 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 WDCPQ9H6R7 721 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 GREM2Q9H772 168 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 RC3H2Q9HBD1 1191 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 COA3Q9Y2R0 106 aaPredicted RBP5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 DAGLAQ9Y4D2 1042 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 DTNAQ9Y4J8 743 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 SOS2Q07890 1332 aaPredicted RBP5.65□□□□□ -1.51
R3HDM1-216ENST00000483065 UBA6A0AVT1 1052 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 ADARB2-AS1A8MUL3 147 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 MTSS1O43312 755 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 TBC1D4O60343 1298 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 NRP2O60462 931 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 NPHS1O60500 1241 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 CCNDBP1O95273 360 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 SLU7O95391 586 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 TGDSO95455 350 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 PRAMEF1O95521 474 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 EOMESO95936 686 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 LPLP06858 475 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 CTSBP07858 339 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 CASQ1P31415 396 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 BMP8BP34820 402 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 RGS2P41220 211 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 LMAN1P49257 510 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 ALDH3A2P51648 485 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 RARSP54136 660 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 NLRP12P59046 1061 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 CDK17Q00537 523 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 MC1RQ01726 317 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 CREB5Q02930 508 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 LRMPQ12912 555 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 NMIQ13287 307 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 UBAP2LQ14157 1087 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 PUM1Q14671 1186 aaKnown RBP eCLIP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 GPR68Q15743 365 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 SMAD1Q15797 465 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 BAK1Q16611 211 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 SKIDA1Q1XH10 827 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 C3orf36Q3SXR2 165 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 KRTCAP3Q53RY4 240 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 TCP11X2Q5H9J9 407 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 C1orf141Q5JVX7 400 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 TTC38Q5R3I4 469 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 HEATR3Q7Z4Q2 680 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 MILR1Q7Z6M3 343 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 GALNT7Q86SF2 657 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 ALYREFQ86V81 257 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 DZIP1LQ8IYY4 767 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 ADSSL1Q8N142 457 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 ZNF655Q8N720 491 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 GDAP1Q8TB36 358 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 KBTBD7Q8WVZ9 684 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 SNX27Q96L92 541 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 FCRL3Q96P31 734 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 PI4K2AQ9BTU6 479 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 FSD1Q9BTV5 496 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 METTL22Q9BUU2 404 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 DNAI2Q9GZS0 605 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 EPS8L2Q9H6S3 715 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 SLC35C2Q9NQQ7 365 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 SACM1LQ9NTJ5 587 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 ADPRHL2Q9NX46 363 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 CHORDC1Q9UHD1 332 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 BLOC1S6Q9UL45 172 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 AP4E1Q9UPM8 1137 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 CLCA2Q9UQC9 943 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 RRP15Q9Y3B9 282 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 LYVE1Q9Y5Y7 322 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 CYP46A1Q9Y6A2 500 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 FLT1P17948 1338 aa5.64□□□□□ -1.51
R3HDM1-216ENST00000483065 PRSS38A1L453 326 aa5.63□□□□□ -1.51
R3HDM1-216ENST00000483065 F8W8V4 182 aa5.63□□□□□ -1.51
R3HDM1-216ENST00000483065 MEIS1O00470 390 aa5.63□□□□□ -1.51
R3HDM1-216ENST00000483065 AMY2AP04746 511 aa5.63□□□□□ -1.51
R3HDM1-216ENST00000483065 ADRB2P07550 413 aa5.63□□□□□ -1.51
R3HDM1-216ENST00000483065 CLTBP09497 229 aa5.63□□□□□ -1.51
R3HDM1-216ENST00000483065 TYRP14679 529 aa5.63□□□□□ -1.51
R3HDM1-216ENST00000483065 HDCP19113 662 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms