RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 FSD2A1L4K1 749 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 TMEM189-UBE2V1I3L0A0 370 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 CLIC2O15247 247 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 LINC01565O15544 149 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 TGFB1I1O43294 461 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 PRPF40AO75400 957 aaKnown RBP9.52□□□□□ -0.89
SNX4-205ENST00000482965 KIF20AO95235 890 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 IL18RAPO95256 599 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 ADRB2P07550 413 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 NFICP08651 508 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 CHRM1P11229 460 aaPredicted RBP9.52□□□□□ -0.89
SNX4-205ENST00000482965 CYP3A5P20815 502 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 KCNA5P22460 613 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 RPL9P32969 192 aaKnown RBP9.52□□□□□ -0.89
SNX4-205ENST00000482965 SCN1AP35498 2009 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 NDUFV1P49821 464 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 CYP2J2P51589 502 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 GUCY2FP51841 1108 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 SNRPFP62306 86 aaKnown RBP9.52□□□□□ -0.89
SNX4-205ENST00000482965 ELAVL2Q12926 359 aaKnown RBP9.52□□□□□ -0.89
SNX4-205ENST00000482965 PTPN14Q15678 1187 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 UPP1Q16831 310 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 USP41Q3LFD5 358 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 FAM171A1Q5VUB5 890 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 JADE1Q6IE81 842 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 CRELD2Q6UXH1 353 aaPredicted RBP9.52□□□□□ -0.89
SNX4-205ENST00000482965 TAS1R1Q7RTX1 841 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 BRSK2Q8IWQ3 736 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 RNF168Q8IYW5 571 aaPredicted RBP9.52□□□□□ -0.89
SNX4-205ENST00000482965 EFHBQ8N7U6 833 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 ZSWIM2Q8NEG5 633 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 GOLGA5Q8TBA6 731 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 SMARCE1Q969G3 411 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 EMILIN2Q9BXX0 1053 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 ASB7Q9H672 318 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 KIAA1586Q9HCI6 787 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 RMND1Q9NWS8 449 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 RBAKQ9NYW8 714 aaPredicted RBP9.52□□□□□ -0.89
SNX4-205ENST00000482965 CGNQ9P2M7 1197 aaKnown RBP9.52□□□□□ -0.89
SNX4-205ENST00000482965 PCDHB8Q9UN66 801 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 DERAQ9Y315 318 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 NUB1Q9Y5A7 615 aa9.52□□□□□ -0.89
SNX4-205ENST00000482965 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.51□□□□□ -0.89
SNX4-205ENST00000482965 ZNF233A6NK53 670 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 TRAPPC3O43617 180 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 CLASP2O75122 1294 aaKnown RBP9.51□□□□□ -0.89
SNX4-205ENST00000482965 EFEMP2O95967 443 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 SRGAP2BP0DMP2 458 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 LRPAP1P30533 357 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 MCM4P33991 863 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 BRCC3P46736 316 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 MRPS5P82675 430 aaKnown RBP9.51□□□□□ -0.89
SNX4-205ENST00000482965 DSG1Q02413 1049 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 TFF2Q03403 129 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 ADAM15Q13444 863 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 COL19A1Q14993 1142 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 ZBTB6Q15916 424 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 AAK1Q2M2I8 961 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 SPATA1Q5VX52 437 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 LLGL2Q6P1M3 1020 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 CEP57Q86XR8 500 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 CBWD2Q8IUF1 395 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 ELOA2Q8IYF1 753 aaPredicted RBP9.51□□□□□ -0.89
SNX4-205ENST00000482965 XXYLT1Q8NBI6 393 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 C3orf58Q8NDZ4 430 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 ATXN2LQ8WWM7 1075 aaKnown RBP9.51□□□□□ -0.89
SNX4-205ENST00000482965 RIN2Q8WYP3 895 aaPredicted RBP9.51□□□□□ -0.89
SNX4-205ENST00000482965 ERCC4Q92889 916 aaPredicted RBP9.51□□□□□ -0.89
SNX4-205ENST00000482965 B3GALT6Q96L58 329 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 GBP4Q96PP9 640 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 GSDMAQ96QA5 445 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 TTPALQ9BTX7 342 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 C2CD2Q9Y426 696 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 PCDHA5Q9Y5H7 936 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 IRAK3Q9Y616 596 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 PLXNA3P51805 1871 aa9.51□□□□□ -0.89
SNX4-205ENST00000482965 MTCL1Q9Y4B5 1905 aaKnown RBP9.5□□□□□ -0.89
SNX4-205ENST00000482965 H3BQ06 376 aaPredicted RBP9.5□□□□□ -0.89
SNX4-205ENST00000482965 I3L4J1 428 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 GALR2O43603 387 aaPredicted RBP9.5□□□□□ -0.89
SNX4-205ENST00000482965 CALUO43852 315 aaPredicted RBP9.5□□□□□ -0.89
SNX4-205ENST00000482965 EXOC3O60645 756 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 LILRB3O75022 631 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 TBX10O75333 385 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 CNPP09543 421 aaKnown RBP9.5□□□□□ -0.89
SNX4-205ENST00000482965 IGFBP6P24592 240 aaPredicted RBP9.5□□□□□ -0.89
SNX4-205ENST00000482965 KLRC2P26717 231 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 TFAMQ00059 246 aaKnown RBP9.5□□□□□ -0.89
SNX4-205ENST00000482965 CREMQ03060 361 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 SURF1Q15526 300 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 CTC1Q2NKJ3 1217 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 RTP2Q5QGT7 225 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 KIAA0319Q5VV43 1072 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 CD300LGQ6UXG3 332 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.5□□□□□ -0.89
SNX4-205ENST00000482965 CLEC17AQ6ZS10 378 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 PPFIBP1Q86W92 1011 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 NT5DC4Q86YG4 428 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 C12orf56Q8IXR9 622 aa9.5□□□□□ -0.89
SNX4-205ENST00000482965 EFCAB13Q8IY85 973 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms