RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 TAP1Q03518 808 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 DSC1Q08554 894 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 KCNJ12Q14500 433 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 NAB2Q15742 525 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 DCAF17Q5H9S7 520 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 TCERG1LQ5VWI1 586 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 INTS8Q75QN2 995 aaKnown RBP21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 FILIP1Q7Z7B0 1213 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 BEST2Q8NFU1 509 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 PAAF1Q9BRP4 392 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 MTMR12Q9C0I1 747 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 MMRN2Q9H8L6 949 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 C2CD2Q9Y426 696 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 CHD9Q3L8U1 2897 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 PTPRJQ12913 1337 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 CHD7Q9P2D1 2997 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 NLRC5Q86WI3 1866 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 LRRIQ3A6PVS8 624 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 SOX1O00570 391 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 MAPK13O15264 365 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 TRIM49P0CI25 452 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 TRIM49CP0CI26 452 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 CDK11BP21127 795 aaKnown RBP21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 SLC11A1P49279 550 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 BFSP1Q12934 665 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 COLGALT1Q8NBJ5 622 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 OR5B17Q8NGF7 314 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 PARD3BQ8TEW8 1205 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 ANKRD36BP1Q96IX9 119 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 ZNF558Q96NG5 402 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 CGRRF1Q99675 332 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 AAASQ9NRG9 546 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 ARMCX3Q9UH62 379 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 DERAQ9Y315 318 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 ALDH2P05091 517 aa21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 CLCNKBP51801 687 aa21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 UVSSAQ2YD98 709 aa21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 KCNT2Q6UVM3 1135 aa21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 USP37Q86T82 979 aa21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 IRF2BP1Q8IU81 584 aa21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 WDR49Q8IV35 697 aa21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 HASPINQ8TF76 798 aa21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 CACTINQ8WUQ7 758 aaKnown RBP21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 CLP1Q92989 425 aaKnown RBP21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 LRCH3Q96II8 777 aa21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 TGS1Q96RS0 853 aaKnown RBP21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 DPP3Q9NY33 737 aa21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 FAN1Q9Y2M0 1017 aa21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 PCDHB12Q9Y5F1 795 aa21.54■■□□□ 1.04
TRAPPC12-220ENST00000482645 F8W810 466 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 NRP1O14786 923 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 TNNC2P02585 160 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 GALTP07902 379 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 LINC00271P0C7V0 271 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 MRE11P49959 708 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 ZBTB6Q15916 424 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 DUOXA2Q1HG44 320 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 TCP11X2Q5H9J9 407 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 NT5DC4Q86YG4 428 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 ARNTL2Q8WYA1 636 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 TSPAN18Q96SJ8 248 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 TMEM175Q9BSA9 504 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 INTS13Q9NVM9 706 aa21.53■■□□□ 1.04
TRAPPC12-220ENST00000482645 GNA14O95837 355 aa21.52■■□□□ 1.04
TRAPPC12-220ENST00000482645 KRT19P08727 400 aa21.52■■□□□ 1.04
TRAPPC12-220ENST00000482645 EEF1GP26641 437 aaKnown RBP21.52■■□□□ 1.04
TRAPPC12-220ENST00000482645 MTIF2P46199 727 aaKnown RBP21.52■■□□□ 1.04
TRAPPC12-220ENST00000482645 EPC2Q52LR7 807 aa21.52■■□□□ 1.04
TRAPPC12-220ENST00000482645 FRMD5Q7Z6J6 570 aa21.52■■□□□ 1.04
TRAPPC12-220ENST00000482645 TMEM173Q86WV6 379 aaPredicted RBP21.52■■□□□ 1.04
TRAPPC12-220ENST00000482645 ANKRD20A12PQ8NF67 263 aa21.52■■□□□ 1.04
TRAPPC12-220ENST00000482645 TMC2Q8TDI7 906 aa21.52■■□□□ 1.04
TRAPPC12-220ENST00000482645 BORCS6Q96GS4 357 aa21.52■■□□□ 1.04
TRAPPC12-220ENST00000482645 METTL14Q9HCE5 456 aaKnown RBP21.52■■□□□ 1.04
TRAPPC12-220ENST00000482645 RWDD3Q9Y3V2 267 aa21.52■■□□□ 1.04
TRAPPC12-220ENST00000482645 PODXLO00592 558 aa21.51■■□□□ 1.03
TRAPPC12-220ENST00000482645 B3GAT3O94766 335 aa21.51■■□□□ 1.03
TRAPPC12-220ENST00000482645 CLSTN1O94985 981 aa21.51■■□□□ 1.03
TRAPPC12-220ENST00000482645 ITGB3P05106 788 aa21.51■■□□□ 1.03
TRAPPC12-220ENST00000482645 CYP3A5P20815 502 aa21.51■■□□□ 1.03
TRAPPC12-220ENST00000482645 BMPR1AP36894 532 aa21.51■■□□□ 1.03
TRAPPC12-220ENST00000482645 BIRC3Q13489 604 aa21.51■■□□□ 1.03
TRAPPC12-220ENST00000482645 ZNF516Q92618 1163 aa21.51■■□□□ 1.03
TRAPPC12-220ENST00000482645 UROC1Q96N76 676 aa21.51■■□□□ 1.03
TRAPPC12-220ENST00000482645 TAB2Q9NYJ8 693 aa21.51■■□□□ 1.03
TRAPPC12-220ENST00000482645 SZT2Q5T011 3432 aa21.51■■□□□ 1.03
TRAPPC12-220ENST00000482645 CSPG5O95196 566 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 KIF4AO95239 1232 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 SERPINC1P01008 464 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 GCLMP48507 274 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 ERVK-21P61565 698 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 FANCCQ00597 558 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 KRT31Q15323 416 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 UPP1Q16831 310 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 HABP4Q5JVS0 413 aaKnown RBP21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 C1orf127Q8N9H9 656 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 COLEC11Q9BWP8 271 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 R3HCC1Q9Y3T6 440 aaKnown RBP21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 PPEF2O14830 753 aa21.5■■□□□ 1.03
TRAPPC12-220ENST00000482645 PHACTR2O75167 634 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms