RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CWH43Q9H720 699 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 KANSL3Q9P2N6 904 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 STXBP5LQ9Y2K9 1186 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 PCDHA11Q9Y5I1 949 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 EYSQ5T1H1 3165 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 CUL9Q8IWT3 2517 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 LINC01553A4QN01 128 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 KCNJ18B7U540 433 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 PPEF2O14830 753 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 TNNC2P02585 160 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 ITGB3P05106 788 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 DNAJB2P25686 324 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 CTNNB1P35222 781 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 GCLMP48507 274 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 SLC11A1P49279 550 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 CLCNKBP51801 687 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 BCAR1P56945 870 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 ZNF445P59923 1031 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 TUSC3Q13454 348 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 KCNJ12Q14500 433 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 SURF1Q15526 300 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 RAB30Q15771 203 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 XKR4Q5GH76 650 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 CT47A1Q5JQC4 288 aaPredicted RBP14.31□□□□□ -0.12
HDAC1-208ENST00000482310 SCARA3Q6AZY7 606 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 WDR49Q8IV35 697 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 FAM114A1Q8IWE2 563 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 COLGALT1Q8NBJ5 622 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 ZNF516Q92618 1163 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 ELMO3Q96BJ8 720 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 GUCD1Q96NT3 240 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 C17orf80Q9BSJ5 609 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 SLC38A7Q9NVC3 462 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 INTS13Q9NVM9 706 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 DPP3Q9NY33 737 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 TAB2Q9NYJ8 693 aa14.31□□□□□ -0.12
HDAC1-208ENST00000482310 UBQLN1Q9UMX0 589 aaKnown RBP14.31□□□□□ -0.12
HDAC1-208ENST00000482310 SMTNL1A8MU46 457 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 PODXLO00592 558 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 MAPK13O15264 365 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 INPPL1O15357 1258 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 XPOTO43592 962 aaKnown RBP14.3□□□□□ -0.12
HDAC1-208ENST00000482310 PHACTR2O75167 634 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 PRKCSHP14314 528 aaPredicted RBP14.3□□□□□ -0.12
HDAC1-208ENST00000482310 CDK11BP21127 795 aaKnown RBP14.3□□□□□ -0.12
HDAC1-208ENST00000482310 IGFBP6P24592 240 aaPredicted RBP14.3□□□□□ -0.12
HDAC1-208ENST00000482310 POLR2BP30876 1174 aaKnown RBP14.3□□□□□ -0.12
HDAC1-208ENST00000482310 NCAPHQ15003 741 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 NAB2Q15742 525 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 C1orf220Q5T0J3 134 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 FRMD5Q7Z6J6 570 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 IRF2BP1Q8IU81 584 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 COLGALT2Q8IYK4 626 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 CACTINQ8WUQ7 758 aaKnown RBP14.3□□□□□ -0.12
HDAC1-208ENST00000482310 TMEM174Q8WUU8 243 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 ZNF558Q96NG5 402 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 BPIFA3Q9BQP9 254 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 C2CD2Q9Y426 696 aa14.3□□□□□ -0.12
HDAC1-208ENST00000482310 GOLGA6L19H0YKK7 550 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 I3L4J1 428 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 NRP1O14786 923 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 KIF4AO95239 1232 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 GNA14O95837 355 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 ITGB1P05556 798 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 ATP1A3P13637 1013 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 LAG3P18627 525 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 PIK3CAP42336 1068 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 ALDH7A1P49419 539 aaKnown RBP14.29□□□□□ -0.12
HDAC1-208ENST00000482310 TAP1Q03518 808 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 PPP3CAQ08209 521 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 DSC1Q08554 894 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 IQCB1Q15051 598 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 DUOXA2Q1HG44 320 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 TDRD10Q5VZ19 366 aaKnown RBP14.29□□□□□ -0.12
HDAC1-208ENST00000482310 FOXR2Q6PJQ5 311 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 KCNT2Q6UVM3 1135 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 USP37Q86T82 979 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 TMEM173Q86WV6 379 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-208ENST00000482310 C1orf127Q8N9H9 656 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 FAM200AQ8TCP9 573 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-208ENST00000482310 TMC2Q8TDI7 906 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 BCL7CQ8WUZ0 217 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-208ENST00000482310 TIFAQ96CG3 184 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 BORCS6Q96GS4 357 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 SLC28A3Q9HAS3 691 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 METTL14Q9HCE5 456 aaKnown RBP14.29□□□□□ -0.12
HDAC1-208ENST00000482310 AGAP1Q9UPQ3 857 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 FAN1Q9Y2M0 1017 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 DERAQ9Y315 318 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 R3HCC1Q9Y3T6 440 aaKnown RBP14.29□□□□□ -0.12
HDAC1-208ENST00000482310 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.29□□□□□ -0.12
HDAC1-208ENST00000482310 MYH10P35580 1976 aa14.29□□□□□ -0.12
HDAC1-208ENST00000482310 IKBKBO14920 756 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 GALTP07902 379 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 MXI1P50539 228 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 SMAD3P84022 425 aaKnown RBP14.28□□□□□ -0.12
HDAC1-208ENST00000482310 MYL7Q01449 175 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 POU5F1Q01860 360 aaKnown RBP14.28□□□□□ -0.12
HDAC1-208ENST00000482310 TRPC3Q13507 836 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms