RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 LRRC27Q9C0I9 530 aa21.67■■□□□ 1.06
MSH5-215ENST00000482280 MRPL44Q9H9J2 332 aaKnown RBP21.67■■□□□ 1.06
MSH5-215ENST00000482280 FBXW11Q9UKB1 542 aa21.67■■□□□ 1.06
MSH5-215ENST00000482280 UBQLN1Q9UMX0 589 aaKnown RBP21.67■■□□□ 1.06
MSH5-215ENST00000482280 EXOC7Q9UPT5 735 aa21.67■■□□□ 1.06
MSH5-215ENST00000482280 BACE2Q9Y5Z0 518 aa21.67■■□□□ 1.06
MSH5-215ENST00000482280 MORC2Q9Y6X9 1032 aaPredicted RBP21.67■■□□□ 1.06
MSH5-215ENST00000482280 SPTLC2O15270 562 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 PIGRP01833 764 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 ASGR2P07307 311 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 IDEP14735 1019 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 NASPP49321 788 aaPredicted RBP21.66■■□□□ 1.06
MSH5-215ENST00000482280 GTF2BQ00403 316 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 RAB33AQ14088 237 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 FOXD4L5Q5VV16 416 aaPredicted RBP21.66■■□□□ 1.06
MSH5-215ENST00000482280 SFR1Q86XK3 245 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 MAP4K3Q8IVH8 894 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 CD302Q8IX05 232 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 C3orf58Q8NDZ4 430 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 LRRC15Q8TF66 581 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 FOXD4L4Q8WXT5 416 aaPredicted RBP21.66■■□□□ 1.06
MSH5-215ENST00000482280 HVCN1Q96D96 273 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 PANK2Q9BZ23 570 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 KCNH6Q9H252 994 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.66■■□□□ 1.06
MSH5-215ENST00000482280 MYH11P35749 1972 aa21.66■■□□□ 1.06
MSH5-215ENST00000482280 TULP1O00294 542 aaPredicted RBP21.65■■□□□ 1.06
MSH5-215ENST00000482280 PLA2G5P39877 138 aa21.65■■□□□ 1.06
MSH5-215ENST00000482280 UVSSAQ2YD98 709 aa21.65■■□□□ 1.06
MSH5-215ENST00000482280 AXDND1Q5T1B0 1012 aaPredicted RBP21.65■■□□□ 1.06
MSH5-215ENST00000482280 ADALQ6DHV7 355 aa21.65■■□□□ 1.06
MSH5-215ENST00000482280 RTL10Q7L3V2 364 aa21.65■■□□□ 1.06
MSH5-215ENST00000482280 GET4Q7L5D6 327 aaPredicted RBP21.65■■□□□ 1.06
MSH5-215ENST00000482280 FBXL6Q8N531 539 aa21.65■■□□□ 1.06
MSH5-215ENST00000482280 SLC7A14Q8TBB6 771 aa21.65■■□□□ 1.06
MSH5-215ENST00000482280 ST6GALNAC4Q9H4F1 302 aa21.65■■□□□ 1.06
MSH5-215ENST00000482280 IGSF9Q9P2J2 1179 aa21.65■■□□□ 1.06
MSH5-215ENST00000482280 A0A0B4J269 797 aa21.64■■□□□ 1.05
MSH5-215ENST00000482280 PPP6R2O75170 966 aa21.64■■□□□ 1.05
MSH5-215ENST00000482280 CYP3A5P20815 502 aa21.64■■□□□ 1.05
MSH5-215ENST00000482280 HOXA9P31269 272 aa21.64■■□□□ 1.05
MSH5-215ENST00000482280 ARPP19P56211 112 aa21.64■■□□□ 1.05
MSH5-215ENST00000482280 SPAG1Q07617 926 aa21.64■■□□□ 1.05
MSH5-215ENST00000482280 POSTNQ15063 836 aa21.64■■□□□ 1.05
MSH5-215ENST00000482280 ZC2HC1CQ53FD0 456 aaPredicted RBP21.64■■□□□ 1.05
MSH5-215ENST00000482280 VARS2Q5ST30 1063 aaKnown RBP21.64■■□□□ 1.05
MSH5-215ENST00000482280 ZNF280DQ6N043 979 aa21.64■■□□□ 1.05
MSH5-215ENST00000482280 PDILTQ8N807 584 aa21.64■■□□□ 1.05
MSH5-215ENST00000482280 BEST2Q8NFU1 509 aa21.64■■□□□ 1.05
MSH5-215ENST00000482280 ZNF707Q96C28 371 aaPredicted RBP21.64■■□□□ 1.05
MSH5-215ENST00000482280 MFSD1Q9H3U5 465 aa21.64■■□□□ 1.05
MSH5-215ENST00000482280 TFIP11Q9UBB9 837 aaKnown RBP21.64■■□□□ 1.05
MSH5-215ENST00000482280 TUBGCP4Q9UGJ1 667 aa21.64■■□□□ 1.05
MSH5-215ENST00000482280 C5orf42Q9H799 3197 aa21.64■■□□□ 1.05
MSH5-215ENST00000482280 TTC26A0AVF1 554 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 LACTBL1A8MY62 500 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 PRRG1O14668 218 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 GCNT3O95395 438 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 YEATS4O95619 227 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 FSHRP23945 695 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 TNFSF9P41273 254 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 AMPD3Q01432 767 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 TDGQ13569 410 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 CTXN3Q4LDR2 81 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 STXBP4Q6ZWJ1 553 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 ZNF720Q7Z2F6 126 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 USP37Q86T82 979 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 CCDC65Q8IXS2 484 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 SYCP3Q8IZU3 236 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 LINC00301Q8NCQ3 95 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 POMGNT1Q8WZA1 660 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 SUSD3Q96L08 255 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 ACCSQ96QU6 501 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 PRRX2Q99811 253 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 PCDHB13Q9Y5F0 798 aa21.63■■□□□ 1.05
MSH5-215ENST00000482280 PLXNA3P51805 1871 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 MYMKA6NI61 221 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 CCL16O15467 120 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 ADAM12O43184 909 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 LRG1P02750 347 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 ZSCAN22P10073 491 aaPredicted RBP21.62■■□□□ 1.05
MSH5-215ENST00000482280 ALCAMQ13740 583 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 ENOX2Q16206 610 aaKnown RBP21.62■■□□□ 1.05
MSH5-215ENST00000482280 DSTYKQ6XUX3 929 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 GRASPQ7Z6J2 395 aaPredicted RBP21.62■■□□□ 1.05
MSH5-215ENST00000482280 ZNF461Q8TAF7 563 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 NXPE3Q969Y0 559 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 HAPLN2Q9GZV7 340 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 CUEDC2Q9H467 287 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 KCNK12Q9HB15 430 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 TBC1D7Q9P0N9 293 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 FBXL21Q9UKT6 434 aa21.62■■□□□ 1.05
MSH5-215ENST00000482280 AGO2Q9UKV8 859 aaKnown RBP21.62■■□□□ 1.05
MSH5-215ENST00000482280 ZFP37Q9Y6Q3 630 aaPredicted RBP21.62■■□□□ 1.05
MSH5-215ENST00000482280 ARHGEF37A1IGU5 675 aa21.61■■□□□ 1.05
MSH5-215ENST00000482280 CUTAO60888 179 aa21.61■■□□□ 1.05
MSH5-215ENST00000482280 LRPAP1P30533 357 aa21.61■■□□□ 1.05
MSH5-215ENST00000482280 TMEM132DQ14C87 1099 aa21.61■■□□□ 1.05
MSH5-215ENST00000482280 FOXD4L6Q3SYB3 417 aaPredicted RBP21.61■■□□□ 1.05
MSH5-215ENST00000482280 CD300LGQ6UXG3 332 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms