RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 MCM6Q14566 821 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 NOLC1Q14978 699 aaKnown RBP eCLIP10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 KARSQ15046 597 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 KYAT1Q16773 422 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 SLC39A4Q6P5W5 647 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 GPBP1Q86WP2 473 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 CEP57Q86XR8 500 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 SUGP1Q8IWZ8 645 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 SLC44A3Q8N4M1 653 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 PRSS33Q8NF86 280 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 ZNF461Q8TAF7 563 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 EPSTI1Q96J88 318 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 SUSD3Q96L08 255 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 PARVGQ9HBI0 331 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 AVENQ9NQS1 362 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 DUSP12Q9UNI6 340 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 STYXL1Q9Y6J8 313 aa10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 ZFP37Q9Y6Q3 630 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-207ENST00000482162 ARHGEF37A1IGU5 675 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 I3L4J1 428 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 TRAK2O60296 914 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 PPP1R37O75864 691 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 C8AP07357 584 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 MYBP10242 640 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 NPR3P17342 541 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 ABCD1P33897 745 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 BRCC3P46736 316 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 AARSP49588 968 aaKnown RBP eCLIP10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 HTR4Q13639 388 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 SLC39A14Q15043 492 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 ENOX2Q16206 610 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 SEZ6Q53EL9 994 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 AXDND1Q5T1B0 1012 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 FAM173BQ6P4H8 233 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 GLYCTKQ8IVS8 523 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 SNX21Q969T3 373 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 WNT16Q9UBV4 365 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 STK17AQ9UEE5 414 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 KCNH3Q9ULD8 1083 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 MAFFQ9ULX9 164 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 CDY1Q9Y6F8 540 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 CITO14578 2027 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 NOTCH4Q99466 2003 aa10.61□□□□□ -0.71
TMEM39A-207ENST00000482162 KMT2EQ8IZD2 1858 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 MYH11P35749 1972 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 VPS37CA5D8V6 355 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 SPDYE4A6NLX3 237 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 K7ELQ4 463 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 M0QZQ0 153 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 OGTO15294 1046 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 OAZ2O95190 189 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 CXCL8P10145 99 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 NASPP49321 788 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 ROR1Q01973 937 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 PPM1LQ5SGD2 360 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 ZBTB41Q5SVQ8 909 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 ZNF720Q7Z2F6 126 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 GRASPQ7Z6J2 395 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 MAP4K3Q8IVH8 894 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 TCEAL8Q8IYN2 117 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 MYCT1Q8N699 235 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 TMEM105Q8N8V8 129 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 BEST2Q8NFU1 509 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 RSAD2Q8WXG1 361 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 LARP4BQ92615 738 aaKnown RBP10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 DNAJC19Q96DA6 116 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 ZSCAN16Q9H4T2 348 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 PIDD1Q9HB75 910 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 ANKFY1Q9P2R3 1169 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 TUBGCP4Q9UGJ1 667 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 CPSF3Q9UKF6 684 aaKnown RBP10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 CDH7Q9ULB5 785 aa10.6□□□□□ -0.71
TMEM39A-207ENST00000482162 WDFY4Q6ZS81 3184 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 FRMD3A2A2Y4 597 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 WDR27A2RRH5 827 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 MYMKA6NI61 221 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 LACTBL1A8MY62 500 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 H7C4K7 107 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 HNRNPDLO14979 420 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 FAM13AO94988 1023 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 ATF2P15336 505 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 FSHRP23945 695 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 MARCKSP29966 332 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 TNFSF9P41273 254 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 PTPN5P54829 565 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 NTHL1P78549 312 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 SPECC1Q5M775 1068 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 LIN9Q5TKA1 542 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 SPATA1Q5VX52 437 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 TPGS2Q68CL5 300 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 CWF19L1Q69YN2 538 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 ASTLQ6HA08 431 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 POTEHQ6S545 545 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 CD302Q8IX05 232 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 SLC7A14Q8TBB6 771 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 FGF13Q92913 245 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 HVCN1Q96D96 273 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 CLIC6Q96NY7 704 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 USP28Q96RU2 1077 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms