RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 POLNQ7Z5Q5 900 aa7.2□□□□□ -1.26
SF3B1-210ENST00000482158 SYT12Q8IV01 421 aa7.2□□□□□ -1.26
SF3B1-210ENST00000482158 RNF169Q8NCN4 708 aa7.2□□□□□ -1.26
SF3B1-210ENST00000482158 PCGF6Q9BYE7 350 aa7.2□□□□□ -1.26
SF3B1-210ENST00000482158 SIDT1Q9NXL6 827 aaKnown RBP7.2□□□□□ -1.26
SF3B1-210ENST00000482158 ANO9A1A5B4 782 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 KIAA0391O15091 583 aaKnown RBP7.19□□□□□ -1.26
SF3B1-210ENST00000482158 PMM2O15305 246 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 MATN4O95460 622 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 MTHFD1P11586 935 aaKnown RBP7.19□□□□□ -1.26
SF3B1-210ENST00000482158 RABGGTBP53611 331 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 CREMQ03060 361 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 ICAM4Q14773 271 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 UBXN2BQ14CS0 331 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 METTL24Q5JXM2 366 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 SYCP2LQ5T4T6 812 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 IL31Q6EBC2 164 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 DRICH1Q6PGQ1 229 aaPredicted RBP7.19□□□□□ -1.26
SF3B1-210ENST00000482158 MAMDC4Q6UXC1 1216 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 SVIPQ8NHG7 77 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 IL31RAQ8NI17 732 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 LRTOMTQ8WZ04 291 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 ANKS1AQ92625 1134 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 TFAP2CQ92754 450 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 CD248Q9HCU0 757 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 SLC45A2Q9UMX9 530 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 PCDHA6Q9UN73 950 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 JAG2Q9Y219 1238 aa7.19□□□□□ -1.26
SF3B1-210ENST00000482158 CFAP69A5D8W1 941 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 POMCP01189 267 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 AMHP03971 560 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 NPR1P16066 1061 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 HK1P19367 917 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 SLC6A2P23975 617 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 PIK3CGP48736 1102 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 CACNB3P54284 484 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 CCDC93Q567U6 631 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 ATXN7L2Q5T6C5 722 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-210ENST00000482158 METRNLQ641Q3 311 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 TTLL10Q6ZVT0 673 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 ZNF808Q8N4W9 903 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-210ENST00000482158 MB21D1Q8N884 522 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 FBXO41Q8TF61 875 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 MIEF2Q96C03 454 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 MTFMTQ96DP5 389 aaKnown RBP7.18□□□□□ -1.26
SF3B1-210ENST00000482158 NAA15Q9BXJ9 866 aaKnown RBP7.18□□□□□ -1.26
SF3B1-210ENST00000482158 HDAC5Q9UQL6 1122 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 USP19O94966 1318 aa7.18□□□□□ -1.26
SF3B1-210ENST00000482158 DRGXA6NNA5 263 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 PRR5-ARHGAP8B1AHC4 643 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 MYO1FO00160 1098 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 PHGDHO43175 533 aaKnown RBP7.17□□□□□ -1.26
SF3B1-210ENST00000482158 FRS3O43559 492 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 MFAP3LO75121 409 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 PRSS23O95084 383 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 MYF5P13349 255 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 HDCP19113 662 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 COMTP21964 271 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 PEX2P28328 305 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 NEK3P51956 506 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 PTTG1IPP53801 180 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 VPS72Q15906 364 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 ATP2B3Q16720 1220 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 EMC10Q5UCC4 262 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 EFCAB12Q6NXP0 572 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 HTR3DQ70Z44 454 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 ZFP28Q8NHY6 868 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 APOL5Q9BWW9 433 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 ZNF700Q9H0M5 742 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 GSTO2Q9H4Y5 243 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 SPON1Q9HCB6 807 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 JKAMPQ9P055 326 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 USP25Q9UHP3 1055 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 CPA4Q9UI42 421 aa7.17□□□□□ -1.26
SF3B1-210ENST00000482158 KLRG2A4D1S0 409 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-210ENST00000482158 PLIN1O60240 522 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 ZNF623O75123 536 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 IPO13O94829 963 aaKnown RBP7.16□□□□□ -1.26
SF3B1-210ENST00000482158 KITP10721 976 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 PHKA1P46020 1223 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 RHBDL3P58872 404 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 EXOSC9Q06265 439 aaKnown RBP7.16□□□□□ -1.26
SF3B1-210ENST00000482158 DCAF17Q5H9S7 520 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-210ENST00000482158 KHDC1LQ5JSQ8 128 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 PPP4R4Q6NUP7 873 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 Q6ZRM9 215 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 ZNF365Q70YC5 407 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 ZFPM1Q8IX07 1006 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 KRT78Q8N1N4 520 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 NLGN4YQ8NFZ3 816 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-210ENST00000482158 OR10H5Q8NGA6 315 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 BRIX1Q8TDN6 353 aaKnown RBP7.16□□□□□ -1.26
SF3B1-210ENST00000482158 TNPO1Q92973 898 aaKnown RBP7.16□□□□□ -1.26
SF3B1-210ENST00000482158 KRTAP4-9Q9BYQ8 210 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 ZDHHC8Q9ULC8 765 aa7.16□□□□□ -1.26
SF3B1-210ENST00000482158 A0A1W2PPL8 197 aa7.15□□□□□ -1.26
SF3B1-210ENST00000482158 CAPN14A8MX76 684 aa7.15□□□□□ -1.26
SF3B1-210ENST00000482158 PQBP1O60828 265 aaKnown RBP7.15□□□□□ -1.26
SF3B1-210ENST00000482158 HAUS5O94927 633 aa7.15□□□□□ -1.26
SF3B1-210ENST00000482158 ACO1P21399 889 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms