RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 ABRAQ8N0Z2 381 aa8.6□□□□□ -1.03
LINC00888-203ENST00000482098 GPR161Q8N6U8 529 aaKnown RBP8.6□□□□□ -1.03
LINC00888-203ENST00000482098 ZNF655Q8N720 491 aaPredicted RBP8.6□□□□□ -1.03
LINC00888-203ENST00000482098 DAGLBQ8NCG7 672 aa8.6□□□□□ -1.03
LINC00888-203ENST00000482098 SLC44A5Q8NCS7 719 aa8.6□□□□□ -1.03
LINC00888-203ENST00000482098 CHAMP1Q96JM3 812 aa8.6□□□□□ -1.03
LINC00888-203ENST00000482098 SCLT1Q96NL6 688 aa8.6□□□□□ -1.03
LINC00888-203ENST00000482098 FAM193BQ96PV7 902 aaPredicted RBP8.6□□□□□ -1.03
LINC00888-203ENST00000482098 PSMG3-AS1Q96PY0 264 aa8.6□□□□□ -1.03
LINC00888-203ENST00000482098 KCNH6Q9H252 994 aa8.6□□□□□ -1.03
LINC00888-203ENST00000482098 EPHX3Q9H6B9 360 aa8.6□□□□□ -1.03
LINC00888-203ENST00000482098 MSRAQ9UJ68 235 aa8.6□□□□□ -1.03
LINC00888-203ENST00000482098 COG5Q9UP83 839 aa8.6□□□□□ -1.03
LINC00888-203ENST00000482098 LZTS1Q9Y250 596 aa8.6□□□□□ -1.03
LINC00888-203ENST00000482098 CACNA1AO00555 2505 aa8.6□□□□□ -1.03
LINC00888-203ENST00000482098 A0A0A0MRY4 1105 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 NPHP3-ACAD11A0A0J9YXS1 232 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 SHISA8B8ZZ34 492 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 OIP5O43482 229 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 ZRANB2O95218 330 aaKnown RBP eCLIP8.59□□□□□ -1.03
LINC00888-203ENST00000482098 HALP42357 657 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 PHKA1P46020 1223 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 USP14P54578 494 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 NUCB1Q02818 461 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 TFCP2Q12800 502 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 SFRP5Q5T4F7 317 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 ANKRD45Q5TZF3 282 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 MFSD5Q6N075 450 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 PSRC1Q6PGN9 363 aaPredicted RBP8.59□□□□□ -1.03
LINC00888-203ENST00000482098 IGF2-ASQ6U949 168 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 CATSPERGQ6ZRH7 1159 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 CCDC129Q6ZRS4 1044 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 DPP9Q86TI2 863 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 ALYREFQ86V81 257 aaKnown RBP8.59□□□□□ -1.03
LINC00888-203ENST00000482098 CMIPQ8IY22 773 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 SHCBP1Q8NEM2 672 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 ACAP3Q96P50 834 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 MTIF3Q9H2K0 278 aaKnown RBP8.59□□□□□ -1.03
LINC00888-203ENST00000482098 PCIF1Q9H4Z3 704 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 IL1RAPL2Q9NP60 686 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 TOMM22Q9NS69 142 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 CCM2LQ9NUG4 571 aaPredicted RBP8.59□□□□□ -1.03
LINC00888-203ENST00000482098 LUZP4Q9P127 313 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 ABCF2Q9UG63 623 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 CBLCQ9ULV8 474 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 DNM3Q9UQ16 869 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 ROBO3Q96MS0 1386 aa8.59□□□□□ -1.03
LINC00888-203ENST00000482098 MROH7Q68CQ1 1323 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 WDFY4Q6ZS81 3184 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 ZBED1O96006 694 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 RARBP10826 455 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 SLC9A1P19634 815 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 IRF9Q00978 393 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 MECOMQ03112 1051 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 LSAMPQ13449 338 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 SMAD2Q15796 467 aaKnown RBP8.58□□□□□ -1.04
LINC00888-203ENST00000482098 CCDC70Q6NSX1 233 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 FRMD7Q6ZUT3 714 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 CHD1LQ86WJ1 897 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 KIAA1958Q8N8K9 716 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 NUP133Q8WUM0 1156 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 FERMT2Q96AC1 680 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 SLC12A9Q9BXP2 914 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 ZDHHC5Q9C0B5 715 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 SEMA6CQ9H3T2 930 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 SLC28A3Q9HAS3 691 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 SWAP70Q9UH65 585 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 FBXO9Q9UK97 447 aaPredicted RBP8.58□□□□□ -1.04
LINC00888-203ENST00000482098 TBX21Q9UL17 535 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 FPGT-TNNI3KV9GXZ4 949 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 FRMPD3Q5JV73 1810 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 MYH2Q9UKX2 1941 aa8.58□□□□□ -1.04
LINC00888-203ENST00000482098 CDK5RAP2Q96SN8 1893 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 A0A1B0GUL7 405 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 PRR33A8MZF0 331 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 PI4K2BG5E9Z4 385 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 TPP1O14773 563 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 PQBP1O60828 265 aaKnown RBP8.57□□□□□ -1.04
LINC00888-203ENST00000482098 HIP1RO75146 1068 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 CBX7O95931 251 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 EOMESO95936 686 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 NFICP08651 508 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 VAV1P15498 845 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 PDE6AP16499 860 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 ADORA2AP29274 412 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 MRE11P49959 708 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 FOXD4Q12950 439 aaPredicted RBP8.57□□□□□ -1.04
LINC00888-203ENST00000482098 ZNF267Q14586 743 aaPredicted RBP8.57□□□□□ -1.04
LINC00888-203ENST00000482098 ALFQ53S48 1182 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 EP400NLQ6ZTU2 488 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 AACSQ86V21 672 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 TEX11Q8IYF3 940 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 CLASRPQ8N2M8 674 aaKnown RBP8.57□□□□□ -1.04
LINC00888-203ENST00000482098 TMEM199Q8N511 208 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 TOP6BLQ8N6T0 577 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 TEX19Q8NA77 164 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 GIMAP7Q8NHV1 300 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 ZNF384Q8TF68 577 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 JADE3Q92613 823 aa8.57□□□□□ -1.04
LINC00888-203ENST00000482098 NSUN4Q96CB9 384 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms