RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 DPP3Q9NY33 737 aa22.4■■□□□ 1.18
VPS16-207ENST00000481812 ITGA11Q9UKX5 1188 aa22.4■■□□□ 1.18
VPS16-207ENST00000481812 ANO9A1A5B4 782 aa22.39■■□□□ 1.17
VPS16-207ENST00000481812 P4HA2O15460 535 aa22.39■■□□□ 1.17
VPS16-207ENST00000481812 N4BP1O75113 896 aaKnown RBP22.39■■□□□ 1.17
VPS16-207ENST00000481812 TRIM49P0CI25 452 aa22.39■■□□□ 1.17
VPS16-207ENST00000481812 TRIM49CP0CI26 452 aa22.39■■□□□ 1.17
VPS16-207ENST00000481812 PAX3P23760 479 aa22.39■■□□□ 1.17
VPS16-207ENST00000481812 SOX4Q06945 474 aaPredicted RBP22.39■■□□□ 1.17
VPS16-207ENST00000481812 PPP3CAQ08209 521 aa22.39■■□□□ 1.17
VPS16-207ENST00000481812 KCNH2Q12809 1159 aa22.39■■□□□ 1.17
VPS16-207ENST00000481812 RAB30Q15771 203 aa22.39■■□□□ 1.17
VPS16-207ENST00000481812 DCAF17Q5H9S7 520 aaPredicted RBP22.39■■□□□ 1.17
VPS16-207ENST00000481812 SV2AQ7L0J3 742 aa22.39■■□□□ 1.17
VPS16-207ENST00000481812 TRAPPC11Q7Z392 1133 aa22.39■■□□□ 1.17
VPS16-207ENST00000481812 GAS2L3Q86XJ1 694 aa22.39■■□□□ 1.17
VPS16-207ENST00000481812 ZNF280BQ86YH2 543 aa22.39■■□□□ 1.17
VPS16-207ENST00000481812 C18orf25Q96B23 403 aaPredicted RBP22.39■■□□□ 1.17
VPS16-207ENST00000481812 MTMR12Q9C0I1 747 aa22.39■■□□□ 1.17
VPS16-207ENST00000481812 KIAA1671Q9BY89 1806 aa22.38■■□□□ 1.17
VPS16-207ENST00000481812 RANBP2P49792 3224 aaKnown RBP22.38■■□□□ 1.17
VPS16-207ENST00000481812 AFPP02771 609 aaKnown RBP22.38■■□□□ 1.17
VPS16-207ENST00000481812 ALDH2P05091 517 aa22.38■■□□□ 1.17
VPS16-207ENST00000481812 TPM2P07951 284 aa22.38■■□□□ 1.17
VPS16-207ENST00000481812 KRT31Q15323 416 aa22.38■■□□□ 1.17
VPS16-207ENST00000481812 HSP90AA4PQ58FG1 418 aa22.38■■□□□ 1.17
VPS16-207ENST00000481812 LMBRD2Q68DH5 695 aaPredicted RBP22.38■■□□□ 1.17
VPS16-207ENST00000481812 KRT39Q6A163 491 aa22.38■■□□□ 1.17
VPS16-207ENST00000481812 FAM109BQ6ICB4 259 aaPredicted RBP22.38■■□□□ 1.17
VPS16-207ENST00000481812 CREBRFQ8IUR6 639 aa22.38■■□□□ 1.17
VPS16-207ENST00000481812 C1orf127Q8N9H9 656 aa22.38■■□□□ 1.17
VPS16-207ENST00000481812 CXorf38Q8TB03 319 aa22.38■■□□□ 1.17
VPS16-207ENST00000481812 TUBGCP4Q9UGJ1 667 aa22.38■■□□□ 1.17
VPS16-207ENST00000481812 COQ4Q9Y3A0 265 aa22.38■■□□□ 1.17
VPS16-207ENST00000481812 MRPL42Q9Y6G3 142 aaKnown RBP22.38■■□□□ 1.17
VPS16-207ENST00000481812 NLRC5Q86WI3 1866 aa22.37■■□□□ 1.17
VPS16-207ENST00000481812 GRXCR1A8MXD5 290 aa22.37■■□□□ 1.17
VPS16-207ENST00000481812 TMEM189-UBE2V1I3L0A0 370 aa22.37■■□□□ 1.17
VPS16-207ENST00000481812 PIRO00625 290 aa22.37■■□□□ 1.17
VPS16-207ENST00000481812 LAG3P18627 525 aa22.37■■□□□ 1.17
VPS16-207ENST00000481812 GCLMP48507 274 aa22.37■■□□□ 1.17
VPS16-207ENST00000481812 FMO5P49326 533 aa22.37■■□□□ 1.17
VPS16-207ENST00000481812 RABGGTBP53611 331 aa22.37■■□□□ 1.17
VPS16-207ENST00000481812 SMAD3P84022 425 aaKnown RBP22.37■■□□□ 1.17
VPS16-207ENST00000481812 UPP1Q16831 310 aa22.37■■□□□ 1.17
VPS16-207ENST00000481812 VWA3BQ502W6 1294 aa22.37■■□□□ 1.17
VPS16-207ENST00000481812 TDRD10Q5VZ19 366 aaKnown RBP22.37■■□□□ 1.17
VPS16-207ENST00000481812 AAASQ9NRG9 546 aa22.37■■□□□ 1.17
VPS16-207ENST00000481812 RWDD3Q9Y3V2 267 aa22.37■■□□□ 1.17
VPS16-207ENST00000481812 GTPBP10A4D1E9 387 aaKnown RBP22.36■■□□□ 1.17
VPS16-207ENST00000481812 B4GALT3O60512 393 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 GALTP07902 379 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 LINC00271P0C7V0 271 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 ATP1A3P13637 1013 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 MXI1P50539 228 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 RBP5P82980 135 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 LRIT3Q3SXY7 679 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 MIIPQ5JXC2 388 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 C9orf57Q5W0N0 161 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 DCLRE1AQ6PJP8 1040 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 APTXQ7Z2E3 356 aaKnown RBP22.36■■□□□ 1.17
VPS16-207ENST00000481812 LRRC52Q8N7C0 313 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 RNF214Q8ND24 703 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 SAMD11Q96NU1 681 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 RBSNQ9H1K0 784 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 NDST4Q9H3R1 872 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 GOLGA2P5Q9HBQ8 144 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 DNAJB4Q9UDY4 337 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 SIX4Q9UIU6 781 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 MSRAQ9UJ68 235 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 SCN1AP35498 2009 aa22.36■■□□□ 1.17
VPS16-207ENST00000481812 TULP1O00294 542 aaPredicted RBP22.35■■□□□ 1.17
VPS16-207ENST00000481812 ZC3H11AO75152 810 aaKnown RBP eCLIP22.35■■□□□ 1.17
VPS16-207ENST00000481812 STAU1O95793 577 aaKnown RBP22.35■■□□□ 1.17
VPS16-207ENST00000481812 ITGB3P05106 788 aa22.35■■□□□ 1.17
VPS16-207ENST00000481812 PNPLA4P41247 253 aa22.35■■□□□ 1.17
VPS16-207ENST00000481812 ALDH7A1P49419 539 aaKnown RBP22.35■■□□□ 1.17
VPS16-207ENST00000481812 COPB1P53618 953 aaKnown RBP22.35■■□□□ 1.17
VPS16-207ENST00000481812 BCAR1P56945 870 aa22.35■■□□□ 1.17
VPS16-207ENST00000481812 CETN1Q12798 172 aa22.35■■□□□ 1.17
VPS16-207ENST00000481812 BIRC3Q13489 604 aa22.35■■□□□ 1.17
VPS16-207ENST00000481812 CBWD6Q4V339 395 aa22.35■■□□□ 1.17
VPS16-207ENST00000481812 CBWD3Q5JTY5 395 aa22.35■■□□□ 1.17
VPS16-207ENST00000481812 CBWD5Q5RIA9 395 aa22.35■■□□□ 1.17
VPS16-207ENST00000481812 KCNT2Q6UVM3 1135 aa22.35■■□□□ 1.17
VPS16-207ENST00000481812 ZNF558Q96NG5 402 aa22.35■■□□□ 1.17
VPS16-207ENST00000481812 COLEC11Q9BWP8 271 aa22.35■■□□□ 1.17
VPS16-207ENST00000481812 PBX4Q9BYU1 374 aa22.35■■□□□ 1.17
VPS16-207ENST00000481812 FAN1Q9Y2M0 1017 aa22.35■■□□□ 1.17
VPS16-207ENST00000481812 LCHNA4D1U4 455 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 LINC01553A4QN01 128 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 CASTOR2A6NHX0 329 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 PODXLO00592 558 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 NRP1O14786 923 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 PHACTR2O75167 634 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 ATICP31939 592 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 OR1G1P47890 313 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 SLC11A1P49279 550 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 CLCNKBP51801 687 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 GUCY2FP51841 1108 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms