RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ARPP19P56211 112 aa20.27■□□□□ 0.84
CLK1-211ENST00000481641 MCL1Q07820 350 aa20.27■□□□□ 0.84
CLK1-211ENST00000481641 HTR4Q13639 388 aa20.27■□□□□ 0.84
CLK1-211ENST00000481641 VARS2Q5ST30 1063 aaKnown RBP20.27■□□□□ 0.84
CLK1-211ENST00000481641 ZPBP2Q6X784 338 aa20.27■□□□□ 0.84
CLK1-211ENST00000481641 BRAPQ7Z569 592 aa20.27■□□□□ 0.84
CLK1-211ENST00000481641 MYCT1Q8N699 235 aa20.27■□□□□ 0.84
CLK1-211ENST00000481641 ITFG1Q8TB96 612 aa20.27■□□□□ 0.84
CLK1-211ENST00000481641 LARSQ9P2J5 1176 aaKnown RBP20.27■□□□□ 0.84
CLK1-211ENST00000481641 TUBGCP4Q9UGJ1 667 aa20.27■□□□□ 0.84
CLK1-211ENST00000481641 KCNG1Q9UIX4 513 aa20.27■□□□□ 0.84
CLK1-211ENST00000481641 CA14Q9ULX7 337 aa20.27■□□□□ 0.84
CLK1-211ENST00000481641 CLIC4Q9Y696 253 aa20.27■□□□□ 0.84
CLK1-211ENST00000481641 NUMBLQ9Y6R0 609 aa20.27■□□□□ 0.84
CLK1-211ENST00000481641 KRBA1A5PL33 1030 aa20.26■□□□□ 0.83
CLK1-211ENST00000481641 ANHXE9PGG2 379 aa20.26■□□□□ 0.83
CLK1-211ENST00000481641 XYLBO75191 536 aa20.26■□□□□ 0.83
CLK1-211ENST00000481641 HOXA9P31269 272 aa20.26■□□□□ 0.83
CLK1-211ENST00000481641 TNFSF9P41273 254 aa20.26■□□□□ 0.83
CLK1-211ENST00000481641 CLCN5P51795 746 aa20.26■□□□□ 0.83
CLK1-211ENST00000481641 SPECC1Q5M775 1068 aa20.26■□□□□ 0.83
CLK1-211ENST00000481641 ZBTB41Q5SVQ8 909 aa20.26■□□□□ 0.83
CLK1-211ENST00000481641 USP49Q70CQ1 688 aa20.26■□□□□ 0.83
CLK1-211ENST00000481641 RASSF8Q8NHQ8 419 aa20.26■□□□□ 0.83
CLK1-211ENST00000481641 RAD54LQ92698 747 aa20.26■□□□□ 0.83
CLK1-211ENST00000481641 DNMT3BQ9UBC3 853 aaKnown RBP20.26■□□□□ 0.83
CLK1-211ENST00000481641 ODF2LQ9ULJ1 636 aa20.26■□□□□ 0.83
CLK1-211ENST00000481641 NUB1Q9Y5A7 615 aa20.26■□□□□ 0.83
CLK1-211ENST00000481641 K7ENM7 598 aa20.25■□□□□ 0.83
CLK1-211ENST00000481641 SLC26A4O43511 780 aa20.25■□□□□ 0.83
CLK1-211ENST00000481641 FAM13AO94988 1023 aa20.25■□□□□ 0.83
CLK1-211ENST00000481641 RPL9P32969 192 aaKnown RBP20.25■□□□□ 0.83
CLK1-211ENST00000481641 LONP1P36776 959 aaKnown RBP20.25■□□□□ 0.83
CLK1-211ENST00000481641 ROR1Q01973 937 aa20.25■□□□□ 0.83
CLK1-211ENST00000481641 UVSSAQ2YD98 709 aa20.25■□□□□ 0.83
CLK1-211ENST00000481641 FAM173BQ6P4H8 233 aa20.25■□□□□ 0.83
CLK1-211ENST00000481641 PARM1Q6UWI2 310 aa20.25■□□□□ 0.83
CLK1-211ENST00000481641 GPR152Q8TDT2 470 aa20.25■□□□□ 0.83
CLK1-211ENST00000481641 FGF14Q92915 247 aa20.25■□□□□ 0.83
CLK1-211ENST00000481641 NXPE3Q969Y0 559 aa20.25■□□□□ 0.83
CLK1-211ENST00000481641 ZHX3Q9H4I2 956 aa20.25■□□□□ 0.83
CLK1-211ENST00000481641 CDH7Q9ULB5 785 aa20.25■□□□□ 0.83
CLK1-211ENST00000481641 TBX20Q9UMR3 447 aa20.25■□□□□ 0.83
CLK1-211ENST00000481641 WDR27A2RRH5 827 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 STK25O00506 426 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 TBC1D4O60343 1298 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 BMP15O95972 392 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 KRT18P05783 430 aaKnown RBP20.24■□□□□ 0.83
CLK1-211ENST00000481641 SRFP11831 508 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 AOC1P19801 751 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 MARCKSP29966 332 aaPredicted RBP20.24■□□□□ 0.83
CLK1-211ENST00000481641 NMT1P30419 496 aaKnown RBP20.24■□□□□ 0.83
CLK1-211ENST00000481641 MCM4P33991 863 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 LIG4P49917 911 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 GUCY2FP51841 1108 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 NUBP1P53384 320 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 SLC8B1Q6J4K2 584 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 ING5Q8WYH8 240 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 FGF13Q92913 245 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 KIF12Q96FN5 646 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 EPSTI1Q96J88 318 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 PARVGQ9HBI0 331 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 WNT16Q9UBV4 365 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 FBXL5Q9UKA1 691 aa20.24■□□□□ 0.83
CLK1-211ENST00000481641 TTC26A0AVF1 554 aa20.23■□□□□ 0.83
CLK1-211ENST00000481641 LACTBL1A8MY62 500 aa20.23■□□□□ 0.83
CLK1-211ENST00000481641 H0YCG3 227 aa20.23■□□□□ 0.83
CLK1-211ENST00000481641 SYN3O14994 580 aa20.23■□□□□ 0.83
CLK1-211ENST00000481641 CLTAP09496 248 aa20.23■□□□□ 0.83
CLK1-211ENST00000481641 ZNF131P52739 623 aa20.23■□□□□ 0.83
CLK1-211ENST00000481641 MRPL58Q14197 206 aaKnown RBP20.23■□□□□ 0.83
CLK1-211ENST00000481641 PTPAQ15257 358 aa20.23■□□□□ 0.83
CLK1-211ENST00000481641 PABPC1LQ4VXU2 614 aaKnown RBP20.23■□□□□ 0.83
CLK1-211ENST00000481641 USP34Q70CQ2 3546 aa20.23■□□□□ 0.83
CLK1-211ENST00000481641 ZNF461Q8TAF7 563 aa20.23■□□□□ 0.83
CLK1-211ENST00000481641 SUSD3Q96L08 255 aa20.23■□□□□ 0.83
CLK1-211ENST00000481641 FIZ1Q96SL8 496 aa20.23■□□□□ 0.83
CLK1-211ENST00000481641 FOXD4L1Q9NU39 408 aa20.23■□□□□ 0.83
CLK1-211ENST00000481641 MYH15Q9Y2K3 1946 aa20.22■□□□□ 0.83
CLK1-211ENST00000481641 HNRNPDLO14979 420 aaKnown RBP20.22■□□□□ 0.83
CLK1-211ENST00000481641 TRAK2O60296 914 aa20.22■□□□□ 0.83
CLK1-211ENST00000481641 ABLIM3O94929 683 aa20.22■□□□□ 0.83
CLK1-211ENST00000481641 SEC24AO95486 1093 aa20.22■□□□□ 0.83
CLK1-211ENST00000481641 CEBPZQ03701 1054 aaKnown RBP20.22■□□□□ 0.83
CLK1-211ENST00000481641 RESTQ13127 1097 aa20.22■□□□□ 0.83
CLK1-211ENST00000481641 CTXN3Q4LDR2 81 aa20.22■□□□□ 0.83
CLK1-211ENST00000481641 SLC39A4Q6P5W5 647 aa20.22■□□□□ 0.83
CLK1-211ENST00000481641 POTEHQ6S545 545 aa20.22■□□□□ 0.83
CLK1-211ENST00000481641 LARP4BQ92615 738 aaKnown RBP20.22■□□□□ 0.83
CLK1-211ENST00000481641 DDX12PQ92771 950 aa20.22■□□□□ 0.83
CLK1-211ENST00000481641 CLIC6Q96NY7 704 aa20.22■□□□□ 0.83
CLK1-211ENST00000481641 PLEKHA5Q9HAU0 1116 aa20.22■□□□□ 0.83
CLK1-211ENST00000481641 TIMM13Q9Y5L4 95 aaPredicted RBP20.22■□□□□ 0.83
CLK1-211ENST00000481641 ZFP37Q9Y6Q3 630 aaPredicted RBP20.22■□□□□ 0.83
CLK1-211ENST00000481641 ZFHX2Q9C0A1 2572 aaPredicted RBP20.22■□□□□ 0.83
CLK1-211ENST00000481641 H7C4K7 107 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 PRRG1O14668 218 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 FAM189A1O60320 539 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 RHOP08100 348 aa20.21■□□□□ 0.83
CLK1-211ENST00000481641 POU2F2P09086 479 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms